Trinca Vitor, Silva Saura R, Almeida João V A, Miranda Vitor F O, Costa-Macedo José V, Carnaval Tatiane K B A, Araújo Draulio B, Prosdocimi Francisco, Varani Alessandro M
Department of Agricultural and Environmental Biotechnology, School of Agricultural and Veterinary Sciences, São Paulo State University (UNESP), Jaboticabal, Brazil.
Department of Biology, School of Agricultural and Veterinary Sciences, São Paulo State University (UNESP), Jaboticabal, São Paulo, Brazil.
Funct Integr Genomics. 2024 Dec 30;25(1):3. doi: 10.1007/s10142-024-01511-y.
Mimosa tenuiflora, popularly known as "Jurema-Preta", is a perennial tree or shrub native to the tropical regions of the Americas, particularly among Afro-Brazilian and Indigenous Brazilian communities. Known for producing N,N-Dimethyltryptamine, a psychedelic compound with profound psychological effects, Jurema-Preta has been studied for its therapeutic potential in mental health. This study offers a comprehensive analysis of the plastid (ptDNA) and mitochondrion (mtDNA) genomes of M. tenuiflora. The 165,639 bp ptDNA sequence features the classical quadripartite structure with 130 protein-coding genes. Comparative genomics among Mimosa species shows high sequence identity in protein-coding genes, with variation in the rpoC1, clpP, ndhA, and ycf1 genes. The ptDNA junctions display distinct features, such as the deletion of the rpl22 gene, and specific simple sequence repeats highlight genetic variation and unique motifs as valuable genetic markers for population studies. Phylogenetic analysis places M. tenuiflora in the Caesalpinioideae, closely related to M. pigra and M. pudica. The 617,839 bp mtDNA sequence exhibits a complex structure with multiple genomic arrangements due to large repeats, encoding 107 protein-coding genes, including the ptDNA petG and psaA genes, and non-retroviral RNA mitoviruses sequences. Comparative analysis across Fabaceae species reveals limited conservation, emphasizing the dynamic nature of plant mitochondrial genomes. The genomic characterization of M. tenuiflora enhances understanding of its evolutionary dynamics, providing insights for population studies and potential applications in ethnopharmacology and conservation.
含羞草(Mimosa tenuiflora),俗称“黑朱雷马”,是一种多年生乔木或灌木,原产于美洲热带地区,在非洲裔巴西人和巴西原住民社区中尤为常见。黑朱雷马以产生N,N-二甲基色胺而闻名,这是一种具有深刻心理效应的迷幻化合物,其在心理健康方面的治疗潜力已得到研究。本研究对含羞草的质体(ptDNA)和线粒体(mtDNA)基因组进行了全面分析。165,639 bp的ptDNA序列具有典型的四分体结构,包含130个蛋白质编码基因。含羞草属物种间的比较基因组学显示,蛋白质编码基因具有高度的序列同一性,但rpoC1、clpP、ndhA和ycf1基因存在变异。ptDNA连接区呈现出独特的特征,如rpl22基因的缺失,特定的简单序列重复突出了遗传变异和独特基序,作为群体研究中有价值的遗传标记。系统发育分析将含羞草置于云实亚科,与无刺含羞草和含羞草关系密切。617,839 bp的mtDNA序列由于大量重复而呈现出具有多种基因组排列的复杂结构,编码107个蛋白质编码基因,包括ptDNA的petG和psaA基因以及非逆转录RNA类线粒体病毒序列。豆科物种间的比较分析显示保守性有限,强调了植物线粒体基因组的动态性质。含羞草的基因组特征增强了对其进化动态的理解,为群体研究以及民族药理学和保护方面的潜在应用提供了见解。