Suppr超能文献

冠状动脉疾病中内质网应激相关生物标志物的鉴定

Identification of Endoplasmic Reticulum Stress-Related Biomarkers in Coronary Artery Disease.

作者信息

Lin Yuanyuan, Ni Lin, Yang Luqun, Li Hao, Chen Zelin, Gao Yuping, Zhu Kaiyi, Jia Yanni, Wu Zhifang, Li Sijin

机构信息

Department of Nuclear Medicine First Hospital of Shanxi Medical University Shanxi Medical University, Taiyuan, Shanxi 030001, China.

Shanxi Bethune Hospital Shanxi Academy of Medical Sciences Tongji Shanxi Hospital Third Hospital of Shanxi Medical University, Taiyuan 030032, China.

出版信息

Cardiovasc Ther. 2024 Jul 3;2024:4664731. doi: 10.1155/2024/4664731. eCollection 2024.

Abstract

Coronary artery disease (CAD) is caused by atherosclerotic lesions in the coronary vessels. Endoplasmic reticulum stress (ERS) acts in cardiovascular disease, and its role in CAD is not clear. A total of 13 differentially expressed ERS-related genes (DEERSRGs) in CAD were identified. Functional enrichment analysis demonstrated the DEERSRGs were mainly enriched in endoplasmic reticulum (ER)-related pathways. Then, eight genes (RCN2, HRC, DERL2, RNF183, CRH, TMED2, PPP1R15A, and IL1A) were authenticated as ERS-related biomarkers in CAD by least absolute shrinkage and selection operator (LASSO). The receiver operating characteristic (ROC) analysis showed that the LASSO logistic model constructed based on biomarkers had a better diagnostic effect, which was confirmed by the ANN and GSE23561 datasets. Also, ROC results showed that seven of the eight biomarkers had better diagnostic effects. The nomogram model had good predictive power, and biomarkers were mostly enriched in pathways associated with CAD. The biomarkers were significantly associated with 10 immune cells, and RCN2, DERL2, TMED2, and RNF183 were negatively correlated with most chemokines. Eight biomarkers had significant correlations with both immunoinhibitors and immunostimulators. In addition, eight biomarkers were significantly different in both CAD and control samples, CRH and HRC were upregulated in CAD. The quantitative reverse transcription-polymerase chain reaction (qRT-PCR) showed that RCN2, HRC, DERL2, CRH, and IL1A were consistent with the bioinformatics analysis. RCN2, HRC, DERL2, RNF183, CRH, TMED2, PPP1R15A, and IL1A were identified as biomarkers of CAD. Functional enrichment analysis and immunoassays for biomarkers provide new ideas for the treatment of CAD.

摘要

冠状动脉疾病(CAD)由冠状动脉血管中的动脉粥样硬化病变引起。内质网应激(ERS)在心血管疾病中起作用,但其在CAD中的作用尚不清楚。在CAD中总共鉴定出13个差异表达的ERS相关基因(DEERSRGs)。功能富集分析表明,DEERSRGs主要富集在内质网(ER)相关途径中。然后,通过最小绝对收缩和选择算子(LASSO)验证了8个基因(RCN2、HRC、DERL2、RNF183、CRH、TMED2、PPP1R15A和IL1A)为CAD中与ERS相关的生物标志物。受试者工作特征(ROC)分析表明,基于生物标志物构建的LASSO逻辑模型具有更好的诊断效果,这在人工神经网络(ANN)和GSE23561数据集得到了证实。此外,ROC结果显示8个生物标志物中的7个具有较好的诊断效果。列线图模型具有良好的预测能力,生物标志物大多富集在与CAD相关的途径中。这些生物标志物与10种免疫细胞显著相关,RCN2、DERL2、TMED2和RNF183与大多数趋化因子呈负相关。8个生物标志物与免疫抑制剂和免疫刺激剂均有显著相关性。此外,8个生物标志物在CAD和对照样本中均有显著差异,CRH和HRC在CAD中上调。定量逆转录-聚合酶链反应(qRT-PCR)表明,RCN2、HRC、DERL2、CRH和IL1A与生物信息学分析结果一致。RCN2、HRC、DERL2、RNF183、CRH、TMED2、PPP1R15A和IL1A被鉴定为CAD的生物标志物。生物标志物的功能富集分析和免疫测定为CAD的治疗提供了新思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf42/11236471/20d402bca62d/CDTP2024-4664731.001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验