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细菌在[具体环境1]和[具体环境2]中的生长温度系统发育模式揭示了向冷适应的渐进和零星进化。

Phyletic patterns of bacterial growth temperature in and reveal gradual and sporadic evolution towards cold adaptation.

作者信息

Lee Kihyun, Kim Seong-Hyeon, Moon Seongjoon, Kim Sangha, Lee Changhan

机构信息

CJ Bioscience, Seoul 04527, Republic of Korea.

Department of Biological Sciences, Ajou University, Suwon 16499, Republic of Korea.

出版信息

ISME Commun. 2024 Dec 23;4(1):ycae163. doi: 10.1093/ismeco/ycae163. eCollection 2024 Jan.

Abstract

Bacterial species adapt to cold environments with diverse molecular mechanisms enabling their growth under low ambient temperature. The emergence of cold-adapted species at macro-evolutionary scale, however, has not been systematically explored. In this study, we performed phylogenetic analysis on the growth temperature traits in the genera that occupy broad environmental and host niches and contain known cold-adapted species. Our results demonstrate that in the genus , cold-adapted species formed a distinct and conserved clade, whereas in , cold-adapted species were sporadically distributed throughout the phylogenetic tree. The cold-adapted clade of exhibited genome-wide signatures of adaptation and possessed clade-specific genes. This indicates that there are diverse evolutionary patterns in the divergence of cold-adapted species among different bacterial genera.

摘要

细菌物种通过多种分子机制适应寒冷环境,使其能够在低温环境下生长。然而,在宏观进化尺度上,适应寒冷的物种的出现尚未得到系统的探索。在本研究中,我们对占据广泛环境和宿主生态位且包含已知适应寒冷物种的属的生长温度性状进行了系统发育分析。我们的结果表明,在该属中,适应寒冷的物种形成了一个独特且保守的分支,而在另一属中,适应寒冷的物种则零星地分布在整个系统发育树中。该属适应寒冷的分支表现出全基因组范围的适应特征,并拥有分支特异性基因。这表明不同细菌属中适应寒冷物种的分化存在多种进化模式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cad7/11694702/895336cc107f/ycae163f1.jpg

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