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基于MRI成像基因组学方法的胶质瘤生存及免疫微环境预测:一项回顾性观察研究

Survival and immune microenvironment prediction of glioma based on MRI imaging genomics method: a retrospective observational study.

作者信息

Wang Zhihao, Yuan Yunbo, Cui Tao, Xu Biao, Zou Zhubei, Xu Qiuyi, Yang Jie, Su Hang, Xiang Chaodong, Wang Xianqi, Yang Jing, Chang Tao, Chen Siliang, Zeng Yunhui, Deng Lanqin, Wang Haoyu, Zhang Shuxin, Yang Yuan, Hu Xiaofei, Chen Wei, Yue Qiang, Liu Yanhui

机构信息

Department of Neurosurgery, West China Hospital, Sichuan University, Chengdu, China.

Chengdu Science and Technology Development Center of CAEP, Chengdu, China.

出版信息

Neurosurg Rev. 2025 Jan 3;48(1):18. doi: 10.1007/s10143-024-03164-8.

Abstract

Glioma is characterized by high heterogeneity and poor prognosis. Attempts have been made to understand its diversity in both genetic expressions and radiomic characteristics, while few integrated the two omics in predicting survival of glioma. This study was intended to investigate the connection between glioma imaging and genome, and examine its predictive value in glioma mortality risk and tumor immune microenvironment (TIME). Clinical, transcriptomics and radiomics data were obtained from public datasets and patients in our center. Correlation analysis between gene expression and radiomic feature (RF) was performed, followed by survival analysis to select RF-related genes (RFRGs) and gene expression-related RFs (GRRFs). After that, RFRGs and GRRFs were used to construct mortality risk prediction model of all glioma and isocitrate dehydrogenase (IDH) wild type (WT) glioma. The association between RFRGs and TIME was explored. Six cohorts composed of 1,754 glioma patients were included. Thirty-five genes and eighty-two RFs demonstrated high correlation with each other. Gene score based on RFRGs was independent predictor of both glioma (P < 0.05) and IDH-WT glioma (P < 0.05). Same score based on GRRFs was also able to stratify risk of both glioma (P < 0.0001) and IDH-WT glioma (P < 0.0001), with nomograms constructed separately. The TIME of gliomas predicted with RFRGs' score found mismatched risk of death with immune response. RFRGs and GRRFs were able to predict glioma mortality risk and TIME. Further studies could validate our results and explore this genome-imaging interactions.

摘要

胶质瘤具有高度异质性和预后不良的特点。人们已尝试从基因表达和放射组学特征两方面了解其多样性,但很少有研究将这两种组学整合起来用于预测胶质瘤的生存期。本研究旨在探讨胶质瘤影像学与基因组之间的联系,并检验其在胶质瘤死亡风险和肿瘤免疫微环境(TIME)预测中的价值。从公共数据集和本中心的患者中获取临床、转录组学和放射组学数据。进行基因表达与放射组学特征(RF)之间的相关性分析,随后进行生存分析以选择RF相关基因(RFRG)和基因表达相关RF(GRRF)。之后,使用RFRG和GRRF构建所有胶质瘤及异柠檬酸脱氢酶(IDH)野生型(WT)胶质瘤的死亡风险预测模型。探讨RFRG与TIME之间的关联。纳入了由1754例胶质瘤患者组成的6个队列。35个基因和82个RF相互之间显示出高度相关性。基于RFRG的基因评分是胶质瘤(P < 0.05)和IDH-WT胶质瘤(P < 0.05)的独立预测指标。基于GRRF的相同评分也能够对胶质瘤(P < 0.0001)和IDH-WT胶质瘤(P < 0.0001)的风险进行分层,并分别构建列线图。用RFRG评分预测的胶质瘤TIME发现死亡风险与免疫反应不匹配。RFRG和GRRF能够预测胶质瘤死亡风险和TIME。进一步的研究可以验证我们的结果并探索这种基因组-影像学相互作用。

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