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对致病性G151R G蛋白门控内向整流钾通道4变体进行计算机模拟研究以鉴定小分子调节剂。

An In Silico Investigation of the Pathogenic G151R G Protein-Gated Inwardly Rectifying K Channel 4 Variant to Identify Small Molecule Modulators.

作者信息

Pitsillou Eleni, Liang Julia J, Kino Noa, Lockwood Jessica L, Hung Andrew, El-Osta Assam, AbuMaziad Asmaa S, Karagiannis Tom C

机构信息

Epigenomic Medicine Laboratory at prospED Polytechnic, Melbourne, VIC 3053, Australia.

School of Science, STEM College, RMIT University, Melbourne, VIC 3001, Australia.

出版信息

Biology (Basel). 2024 Nov 29;13(12):992. doi: 10.3390/biology13120992.

Abstract

Primary aldosteronism is characterised by the excessive production of aldosterone, which is a key regulator of salt metabolism, and is the most common cause of secondary hypertension. Studies have investigated the association between primary aldosteronism and genetic alterations, with pathogenic mutations being identified. This includes a glycine-to-arginine substitution at position 151 (G151R) of the G protein-activated inward rectifier potassium (K) channel 4 (GIRK4), which is encoded by the gene. Mutations in GIRK4 have been found to reduce the selectivity for K ions, resulting in membrane depolarisation, the activation of voltage-gated Ca channels, and an increase in aldosterone secretion. As a result, there is an interest in identifying and exploring the mechanisms of action of small molecule modulators of wildtype (WT) and mutant channels. In order to investigate the potential modulation of homotetrameric GIRK4 and GIRK4 channels, homology models were generated. Molecular dynamics (MD) simulations were performed, followed by a cluster analysis to extract starting structures for molecular docking. The central cavity has been previously identified as a binding site for small molecules, including natural compounds. The OliveNet database, which consists of over 600 compounds from , was subsequently screened against the central cavity. The binding affinities and interactions of the docked ligands against the GIRK4 and GIRK4 channels were then examined. Based on the results, luteolin-7-O-rutinoside, pheophorbide a, and corosolic acid were identified as potential lead compounds. The modulatory activity of olive-derived compounds against the WT and mutated forms of the GIRK4 channel can be evaluated further in vitro.

摘要

原发性醛固酮增多症的特征是醛固酮分泌过多,醛固酮是盐代谢的关键调节因子,也是继发性高血压最常见的病因。研究已调查原发性醛固酮增多症与基因改变之间的关联,并已鉴定出致病突变。这包括由该基因编码的G蛋白激活内向整流钾(K)通道4(GIRK4)第151位(G151R)的甘氨酸到精氨酸替换。已发现GIRK4中的突变会降低对K离子的选择性,导致膜去极化、电压门控钙通道激活以及醛固酮分泌增加。因此,人们有兴趣识别和探索野生型(WT)和突变通道的小分子调节剂的作用机制。为了研究同源四聚体GIRK4和GIRK4通道的潜在调节作用,构建了同源模型。进行了分子动力学(MD)模拟,随后进行聚类分析以提取用于分子对接的起始结构。中央腔先前已被确定为小分子(包括天然化合物)的结合位点。随后针对中央腔筛选了由超过600种来自的化合物组成的OliveNet数据库。然后检查对接配体与GIRK4和GIRK4通道的结合亲和力和相互作用。基于这些结果,木犀草素-7-O-芸香糖苷、脱镁叶绿酸a和科罗索酸被确定为潜在的先导化合物。橄榄衍生化合物对GIRK4通道野生型和突变形式的调节活性可在体外进一步评估。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/404c/11727529/6d497ac011ff/biology-13-00992-g001.jpg

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