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东北酸菜发酵液中亚硝酸盐酶促降解和酸降解过程中微生物多样性分析

Analysis of Microbial Diversity Dominating Nitrite Enzymatic Degradation and Acidic Degradation in the Fermentation Broth of Northeast Sauerkraut.

作者信息

Xu Xiangru, Zhang Meng, Tao Yuefei, Wei Wei

机构信息

School of Agricultural Engineering, Jiangsu University, Zhenjiang 212013, China.

出版信息

Foods. 2024 Dec 23;13(24):4168. doi: 10.3390/foods13244168.

Abstract

Nitrite hazard is an important food safety issue in the production process of Chinese Northeastern sauerkraut, but this nitrite can be eliminated through microbial enzymatic degradation and acidic degradation as fermentation progresses. Therefore, analyzing the microbial diversity that dominates nitrite degradation in Chinese Northeastern sauerkraut can provide a reference for its safe production. In this study, based on the dynamic monitoring of nitrite concentration, pH, and the abundance of nitrite reductase genes ( and ) and the application of high-throughput sequencing technology and various statistical analysis methods, the microbial groups associated with nitrite enzymatic degradation and acidic degradation in Northeast sauerkraut fermentation broth were analyzed. During the nitrite peak period of Northeast sauerkraut fermentation broth, the nitrite concentration reached 32.15 mg/kg, the pH was 4.7, and the abundances of the nitrite reductase genes and were 3.0 × 10 and 4.9 × 10 copies/μL, respectively. At this stage, nitrite degradation was likely dominated by enzymatic activities. Microbial phyla such as (38.8%), (19.2%), and the archaeal phylum (1.1%) showed strong correlations with nitrite. Among the genera within these three phyla, , and exhibited significant differences in abundance compared to the late fermentation stage and were identified as the primary microbial groups likely driving the enzymatic degradation. During the nitrite degradation period, the nitrite concentration decreased to 0.04 mg/kg, the pH dropped to 3.6, and the abundances of and genes were reduced to 1.0 × 10 copies/μL. At this stage, the nitrite degradation was primarily driven by acid activity. The bacterial phylum (99%) exhibited a strong correlation with pH. Within this phylum, the genus , which showed significant differences in abundance compared to the early fermentation stage, was identified as the primary microbial group indirectly contributing to acidic degradation. This study provides guidance for the isolation of food-grade prokaryotic microbial strains capable of nitrite degradation. Additionally, the findings offer a methodological reference for conducting future research on nitrite-degrading microorganisms in fermented vegetable broths.

摘要

亚硝酸盐危害是东北酸菜生产过程中的一个重要食品安全问题,但随着发酵的进行,这种亚硝酸盐可通过微生物酶解和酸解作用被消除。因此,分析主导东北酸菜中亚硝酸盐降解的微生物多样性可为其安全生产提供参考。本研究基于对亚硝酸盐浓度、pH值以及亚硝酸盐还原酶基因( 和 )丰度的动态监测,并应用高通量测序技术和各种统计分析方法,对东北酸菜发酵液中与亚硝酸盐酶解和酸解相关的微生物群落进行了分析。在东北酸菜发酵液的亚硝酸盐高峰期,亚硝酸盐浓度达到32.15毫克/千克,pH值为4.7,亚硝酸盐还原酶基因 和 的丰度分别为3.0×10和4.9×10拷贝/微升。在此阶段,亚硝酸盐降解可能主要由酶活性主导。诸如 (38.8%)、 (19.2%)和古菌门 (1.1%)等微生物门类与亚硝酸盐呈现出强相关性。在这三个门类中的属类中, 、 和 与发酵后期相比丰度存在显著差异,并被确定为可能驱动酶解的主要微生物群落。在亚硝酸盐降解期,亚硝酸盐浓度降至0.04毫克/千克,pH值降至3.6, 和 基因的丰度降至1.0×10拷贝/微升。在此阶段,亚硝酸盐降解主要由酸活性驱动。细菌门 (99%)与pH值呈现出强相关性。在该门类中,与发酵前期相比丰度存在显著差异的 属被确定为间接促成酸解的主要微生物群落。本研究为分离能够降解亚硝酸盐的食品级原核微生物菌株提供了指导。此外,研究结果为今后开展发酵蔬菜液中亚硝酸盐降解微生物的研究提供了方法学参考。

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