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属于NPF(NRT1/PTR)6亚家族的植物硝酸盐转运蛋白的功能和分子特征

Functional and Molecular Characterization of Plant Nitrate Transporters Belonging to NPF (NRT1/PTR) 6 Subfamily.

作者信息

Nedelyaeva Olga I, Khramov Dmitry E, Balnokin Yurii V, Volkov Vadim S

机构信息

K.A. Timiryazev Institute of Plant Physiology RAS, 127276 Moscow, Russia.

出版信息

Int J Mol Sci. 2024 Dec 20;25(24):13648. doi: 10.3390/ijms252413648.

Abstract

Plant nitrate transporters in the NPF (NRT1) family are characterized by multifunctionality and their involvement in a number of physiological processes. The proteins in this family have been identified in many monocotyledonous and dicotyledonous species: a bioinformatic analysis predicts from 20 to 139 members in the plant genomes sequenced so far, including mosses. Plant NPFs are phylogenetically related to proton-coupled oligopeptide transporters, which are evolutionally conserved in all kingdoms of life apart from Archaea. The phylogenetic analysis of the plant NPF family is based on the amino acid sequences present in databases; an analysis identified a separate NPF6 clade (subfamily) with the first plant nitrate transporters studied at the molecular level. The available information proves that proteins of the NPF6 clade play key roles not only in the supply of nitrate and its allocation within different parts of plants but also in the transport of chloride, amino acids, ammonium, and plant hormones such as auxins and ABA. Moreover, members of the NPF6 family participate in the perception of nitrate and ammonium, signaling, plant responses to different abiotic stresses, and the development of tolerance to these stresses and contribute to the structure of the root-soil microbiome composition. The available information allows us to conclude that genes are among the promising targets for engineering/editing to increase the productivity of crops and their tolerance to stresses. The present review summarizes the available published data and our own results on members of the NPF6 clade of nitrate transporters, especially under salinity; we outline their molecular, structural, and functional characteristics and suggest potential lines for future research.

摘要

NPF(NRT1)家族中的植物硝酸盐转运蛋白具有多功能性,并参与多种生理过程。该家族中的蛋白质已在许多单子叶和双子叶植物物种中得到鉴定:一项生物信息学分析预测,在目前已测序的植物基因组(包括苔藓)中,该家族成员有20至139个。植物NPF与质子偶联寡肽转运蛋白在系统发育上相关,后者在除古细菌外的所有生命王国中都具有进化保守性。对植物NPF家族的系统发育分析基于数据库中存在的氨基酸序列;一项分析确定了一个单独的NPF6进化枝(亚家族),其中包含最早在分子水平上研究的植物硝酸盐转运蛋白。现有信息证明,NPF6进化枝的蛋白质不仅在硝酸盐供应及其在植物不同部位的分配中起关键作用,而且在氯离子、氨基酸、铵以及生长素和脱落酸等植物激素的运输中也起关键作用。此外,NPF6家族成员参与硝酸盐和铵的感知、信号传导、植物对不同非生物胁迫的反应以及对这些胁迫的耐受性发展,并有助于根际土壤微生物群落组成的结构。现有信息使我们能够得出结论,这些基因是通过工程/编辑提高作物生产力及其胁迫耐受性的有前景的目标之一。本综述总结了已发表的关于硝酸盐转运蛋白NPF6进化枝成员的可用数据以及我们自己的研究结果,特别是在盐胁迫下的情况;我们概述了它们的分子、结构和功能特征,并提出了未来研究的潜在方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab7d/11677463/8d1f2a3c0a31/ijms-25-13648-g004.jpg

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