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使用重组酶聚合酶扩增结合侧向流动试纸条快速准确检测(双翅目:丽蝇科)

Rapid and Accurate Detection of (Diptera: Calliphoridae) Using Recombinase Polymerase Amplification Combined with Lateral Flow Dipstick.

作者信息

Ye Chengxin, Tang Xuan, Yang Fengqin, Zhang Xiangyan, Shang Yanjie, Xia Yang, Wang Yuanxing, Guo Shaojiang, Zha Lagabaiyila, Guo Yadong, Wen Dan

机构信息

Department of Forensic Science, School of Basic Medical Sciences, Central South University, Changsha 410013, China.

Public Security Forensic Center of Haidian, Beijing 100089, China.

出版信息

Insects. 2024 Dec 20;15(12):1008. doi: 10.3390/insects15121008.

DOI:10.3390/insects15121008
PMID:39769610
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11677130/
Abstract

Estimating the postmortem interval (PMI) is critical in the field of forensic science, and necrophagous insects play a significant role in this process. (Fabricius) (Diptera: Calliphoridae) is a common necrophagous insect species, making its rapid and accurate identification essential. However, commonly used molecular biology methods, such as DNA barcode, still have some limitations in identifying necrophagous insects as they are often complex, time-consuming, and reliant on laboratory instruments. Therefore, in this study, we have developed an innovative detection system for the rapid and accurate identification of based on the Cytochrome b gene using recombinase polymerase amplification (RPA) and lateral flow dipstick (LFD) in combination. The developed RPA-LFD detection system achieved complete amplification in just 15 min at 37 °C with good sensitivity and specificity. Only 7.8 × 10 ng or more of target DNA fragments were required, and a positive detection rate of 100% was achieved in 18 samples from actual cases. In addition, the ability of the developed RPA-LFD detection system in combination with rapid DNA extraction methods to enable on-site detection was preliminarily explored. The results suggested that when the RPA-LFD detection system was combined with the grinding ddHO extraction method (a rapid DNA extraction method), the process from species acquisition to visualization of detection results could be completed in less than 20 min. In conclusion, this innovative RPA-LFD detection system outperforms commonly used molecular biology methods for identification in terms of speed, sensitivity and convenience, making it suitable for direct application at crime scenes, promising to provide important assistance in estimating PMI and expanding the impact of forensic entomological evidence.

摘要

估计死后间隔时间(PMI)在法医学领域至关重要,食尸性昆虫在这一过程中发挥着重要作用。丝光绿蝇(法布里丘斯)(双翅目:丽蝇科)是一种常见的食尸性昆虫物种,因此对其进行快速准确的鉴定至关重要。然而,常用的分子生物学方法,如DNA条形码技术,在鉴定食尸性昆虫时仍存在一些局限性,因为它们通常复杂、耗时且依赖实验室仪器。因此,在本研究中,我们开发了一种创新的检测系统,基于细胞色素b基因,利用重组酶聚合酶扩增(RPA)和侧向流动试纸条(LFD)相结合的方法,对丝光绿蝇进行快速准确的鉴定。所开发的RPA-LFD检测系统在37℃下仅需15分钟即可完成完全扩增,具有良好的灵敏度和特异性。仅需7.8×10 ng或更多的目标DNA片段,并且在18个实际案例样本中实现了100%的阳性检测率。此外,还初步探索了所开发的RPA-LFD检测系统与快速DNA提取方法相结合进行现场检测的能力。结果表明,当RPA-LFD检测系统与研磨ddHO提取法(一种快速DNA提取方法)相结合时,从物种采集到检测结果可视化的过程可在不到20分钟内完成。总之,这种创新的RPA-LFD检测系统在丝光绿蝇鉴定的速度、灵敏度和便利性方面优于常用的分子生物学方法,使其适用于在犯罪现场直接应用,有望为估计PMI提供重要帮助,并扩大法医昆虫学证据的影响力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/42aa33fc2d25/insects-15-01008-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/4a6a91590e6b/insects-15-01008-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/364deeecf0aa/insects-15-01008-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/c3839996657a/insects-15-01008-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/1327904afe6b/insects-15-01008-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/42aa33fc2d25/insects-15-01008-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/4a6a91590e6b/insects-15-01008-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/364deeecf0aa/insects-15-01008-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/c3839996657a/insects-15-01008-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/1327904afe6b/insects-15-01008-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/28be/11677130/42aa33fc2d25/insects-15-01008-g005.jpg

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