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玉米种子内生细菌在子代传递过程中的保守性与动态变化

Conservation and Dynamics of Maize Seed Endophytic Bacteria Across Progeny Transmission.

作者信息

Zhai Kaihui, Zhang Yingying, Zhao Caihong, Wang Qing, Gao Xiquan

机构信息

State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, Nanjing Agricultural University, Nanjing 210095, China.

Collaborative Innovation Center for Modern Crop Production Co-Sponsored by Province and Ministry (CIC-MCP), Nanjing Agricultural University, Nanjing 210095, China.

出版信息

Microorganisms. 2024 Nov 22;12(12):2399. doi: 10.3390/microorganisms12122399.

Abstract

Maize ( L.) is an important cereal crop species for food, feedstock and industrial material. Maize seeds host a suitable ecosystem for endophytic bacteria, facilitating seed germination and seedling growth. However, the inheritance, diversity and potential function of seed endophytic bacteria in maize remain largely unexplored. In this study, the endophytic bacteria in the seeds of maize inbred line WU109 collected during three consecutive seasons were identified using 16S rDNA sequencing. Core community composition was essentially consistent across three seed generations and two planting locations. In total, 212 operational taxonomic units (OTUs) belonging to 11 phyla were identified, among which proteobacteria was the dominant phylum. Fifty-six OTUs were conserved across three seed generations. Within them, 16 OTUs were core components and the dominant OTUs were , , and , accounting for 60% of the total abundance of OTUs. COG and KEGG analyses showed that the function of seed endophytic bacteria was mainly enriched in metabolic processes, especially in amino acid, carbohydrate and energy metabolism. Taken together, the results suggested that the community of maize seed endophytic bacteria was likely co-shaped by both genetic determination and the environment, while the core constitutes of seed endophytes were largely conserved due to transgenerational transmission. Establishing the mutualistic link between the maize seed and its endophytic bacteria enables the exploitation of the potential of endophytes for enhancing crop production. This finding provides a reference to better understand the inheritance and composition of seed core endophytic bacteria in maize.

摘要

玉米(L.)是一种重要的谷类作物,可用于食品、原料和工业材料。玉米种子为内生细菌提供了适宜的生态系统,有助于种子萌发和幼苗生长。然而,玉米种子内生细菌的遗传、多样性和潜在功能在很大程度上仍未得到探索。在本研究中,利用16S rDNA测序技术对连续三个季节收集的玉米自交系WU109种子中的内生细菌进行了鉴定。三个种子世代和两个种植地点的核心群落组成基本一致。总共鉴定出属于11个门的212个操作分类单元(OTU),其中变形菌门是优势门。在三个种子世代中共有56个OTU是保守的。其中,16个OTU是核心组分,优势OTU为 、 、 和 ,占OTU总丰度的60%。COG和KEGG分析表明,种子内生细菌的功能主要富集在代谢过程中,尤其是氨基酸、碳水化合物和能量代谢。综上所述,结果表明玉米种子内生细菌群落可能是由遗传决定和环境共同塑造的,而种子内生菌的核心组成部分由于跨代传播而在很大程度上是保守的。建立玉米种子与其内生细菌之间的共生联系能够挖掘内生菌在提高作物产量方面的潜力。这一发现为更好地理解玉米种子核心内生细菌的遗传和组成提供了参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fea/11676384/364cb79bb4c1/microorganisms-12-02399-g001.jpg

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