Suppr超能文献

枣中木葡聚糖内转糖基酶/水解酶多基因家族的全基因组鉴定及其在不同环境胁迫下的表达模式

Genome-Wide Identification of Xyloglucan Endotransglucosylase/Hydrolase Multigene Family in Chinese Jujube () and Their Expression Patterns Under Different Environmental Stresses.

作者信息

Refaiy Mohamed, Tahir Muhammad, Jiao Lijun, Zhang Xiuli, Zhang Huicheng, Chen Yuhan, Xu Yaru, Song Shuang, Pang Xiaoming

机构信息

State Key Laboratory of Tree Genetics and Breeding, National Engineering Research Center of Tree Breeding and Ecological Restoration, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Biotechnology, Beijing Forestry University, Beijing 100083, China.

Shuangjing Forest Farm, Aohan Banner, Chifeng 028000, China.

出版信息

Plants (Basel). 2024 Dec 15;13(24):3503. doi: 10.3390/plants13243503.

Abstract

The Xyloglucan endotransglucosylase/hydrolase (XTH) family, a group of cell wall-modifying enzymes, plays crucial roles in plant growth, development, and stress adaptation. The quality and yield of Chinese jujube () fruit are significantly impacted by environmental stresses, including excessive salinity, drought, freezing, and disease. However, there has been no report of the XTH encoding genes present in the Chinese jujube genome and their response transcription level under various stresses. This study provides an in-depth analysis of genes in the genome of Chinese jujube and elucidates their structural motifs, regulatory networks, and expression patterns under various stresses. A total of 29 genes were identified from the genome. Phylogenetic analysis classifies genes into four distinct groups, while conserved motifs and domain analyses reveal coordinated xyloglucan modifications, highlighting key shared motifs and domains. Interaction network predictions suggest that may interact with proteins such as Expansin-B1 (EXPB1) and Pectin Methylesterase 22 (PME22). Additionally, cis-regulatory element analysis enhances our understanding of Chinese jujube plant's defensive systems, where TCA- and TGACG-motifs process environmental cues and orchestrate stress responses. Expression profiling revealed that and were significantly upregulated under salt, drought, freezing, and phytoplasma infection, indicating their involvement in biotic and abiotic stress responses. Collectively, these findings deepen our understanding of the functional roles of Chinese jujube , emphasizing their regulatory function in adaptive responses in Chinese jujube plants.

摘要

木葡聚糖内转糖基酶/水解酶(XTH)家族是一类细胞壁修饰酶,在植物生长、发育和胁迫适应中发挥着关键作用。枣()果实的品质和产量受到环境胁迫的显著影响,包括盐度过高、干旱、冷冻和病害。然而,关于枣基因组中存在的XTH编码基因及其在各种胁迫下的转录水平响应尚无报道。本研究对枣基因组中的基因进行了深入分析,阐明了它们的结构基序、调控网络以及在各种胁迫下的表达模式。从枣基因组中总共鉴定出29个基因。系统发育分析将基因分为四个不同的组,而保守基序和结构域分析揭示了木葡聚糖修饰的协调性,突出了关键的共享基序和结构域。相互作用网络预测表明,可能与扩张蛋白-B1(EXPB1)和果胶甲酯酶22(PME22)等蛋白质相互作用。此外,顺式调控元件分析增强了我们对枣树防御系统的理解,其中TCA-和TGACG-基序处理环境线索并协调胁迫反应。表达谱分析表明,在盐、干旱、冷冻和植原体感染下显著上调,表明它们参与生物和非生物胁迫反应。总的来说,这些发现加深了我们对枣功能作用的理解,强调了它们在枣树适应性反应中的调控功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7269/11677919/7fc39964eef2/plants-13-03503-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验