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单链结合蛋白(SSB)促进解旋酶DnaB穿过复制起点oriC处的DnaA复合物,以进行双向复制。

SSB promotes DnaB helicase passage through DnaA complexes at the replication origin oriC for bidirectional replication.

作者信息

Akama Yusuke, Yoshida Ryusei, Ozaki Shogo, Kawakami Hironori, Katayama Tsutomu

机构信息

Department of Molecular Biology, Graduate School of Pharmaceutical Sciences, Kyushu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka 812-8582, Japan.

出版信息

J Biochem. 2025 Apr 2;177(4):305-316. doi: 10.1093/jb/mvaf003.

Abstract

For bidirectional replication in Escherichia coli, higher order complexes are formed at the replication origin oriC by the initiator protein DnaA, which locally unwinds the left edge of oriC to promote the loading of two molecules of DnaB helicases onto the unwound region via dynamic interactions with the helicase-loader DnaC and the oriC-bound DnaA complex. One of the two helicases must translocate rightwards through oriC-bound DnaA complex. Here, we used a synthetic forked oriC DNA, which mimics the unwound state of oriC, to examine DnaB translocation through the oriC-bound DnaA complex. We found that DnaB helicase alone cannot pass through the oriC-bound DnaA complex without the help of single-strand binding protein (SSB). In the presence of SSB, DnaB passed through this complex along with its helicase function, releasing DnaA molecules. In addition, DnaB helicase activity is known to be inhibited by oversupply of DnaC, but this inhibition was relieved by SSB. These results suggest a mechanism that when two DnaB helicases are loaded at oriC, one translocates leftwards to expand the DnaA-unwound region and allows SSB binding to the single-stranded DNA, and such SSB molecules then stimulate translocation of the other helicase rightwards through the oriC-bound DnaA complex.

摘要

在大肠杆菌的双向复制过程中,起始蛋白DnaA在复制起点oriC处形成高阶复合物,该复合物局部解开oriC的左边缘,通过与解旋酶装载蛋白DnaC和结合在oriC上的DnaA复合物的动态相互作用,促进两个DnaB解旋酶分子装载到解开的区域。两个解旋酶中的一个必须通过结合在oriC上的DnaA复合物向右移位。在这里,我们使用了一种合成的叉状oriC DNA,它模拟了oriC的解旋状态,来研究DnaB通过结合在oriC上的DnaA复合物的移位。我们发现,在没有单链结合蛋白(SSB)的帮助下,单独的DnaB解旋酶无法通过结合在oriC上的DnaA复合物。在有SSB存在的情况下,DnaB伴随着其解旋酶功能通过该复合物,释放出DnaA分子。此外,已知DnaB解旋酶活性会受到DnaC供应过量的抑制,但这种抑制作用可被SSB缓解。这些结果表明了一种机制,即当两个DnaB解旋酶装载在oriC上时,一个向左移位以扩大DnaA解开的区域并允许SSB结合到单链DNA上,然后这些SSB分子会刺激另一个解旋酶通过结合在oriC上的DnaA复合物向右移位。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a568/11952115/87f2929e33d7/mvaf003ga.jpg

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