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新种f.a.的鉴定以及核糖体RNA顺反子中的大片段插入和缺失导致该属的分化。

Identification of f.a., sp. nov. and large indels in the rRNA cistron that split the genus.

作者信息

Sipiczki Matthias, Baghela Abhishek

机构信息

Department of Genetics and Applied Microbiology, University of Debrecen, Debrecen, Hungary.

National Fungal Culture Collection of India (NFCCI), Biodiversity and Palaeobiology Group, MACS-Agharkar Research Institute, Pune, India.

出版信息

Int J Syst Evol Microbiol. 2025 Jan;75(1). doi: 10.1099/ijsem.0.006629.

Abstract

Yeast strains representing a novel asexual ascomycetous species were isolated from seven flowers. Sequencing of the chromosomal regions coding for the D1/D2 domains of the large subunit ribosomal RNA, the ITS1-5.8S-ITS2 segments and parts of the gene coding for the small subunit ribosomal RNA showed that the isolates were conspecific. Comparative analysis of these sequences and the corresponding sequences of the type strains of ascomycetous yeasts revealed that the strains represent a hitherto undescribed species belonging to the subclade of the genus . The new species is osmotolerant and can develop invasive pseudohyphae, but does not form spores. For the new species, the name f.a. (forma asexualis) is proposed. The holotype, preserved in a metabolically inactive state, is CBS 12960 (extype cultures: 2-1361 and CCY 90-2-1, NCAIM Y.02123). The GenBank accession numbers of barcode sequences are JX515983 (D1/D2 domain), JX515985 (ITS1-5.8S-ITS2 and partial 18S rRNA gene), PQ613837 ( partial sequence) and PQ613838 ( partial sequence). MycoBank: MB855459. The analysis of the D1/D2 and internal transcribed spacer (ITS) sequences of the type strains of species of the genus identified multiple multinucleotide indels that can be used as taxonomic markers (InDel markers). The indel patterns of the subclades are very different and homogeneous within the subclades. This result reinforces the idea raised, but also refuted, in previous studies that the subclades may represent different genera.

摘要

从七朵花中分离出了代表一种新型无性子囊菌酵母物种的酵母菌株。对编码大亚基核糖体RNA的D1/D2结构域、ITS1-5.8S-ITS2片段以及编码小亚基核糖体RNA的基因部分的染色体区域进行测序,结果表明这些分离株属于同一物种。对这些序列与子囊菌酵母模式菌株的相应序列进行比较分析后发现,这些菌株代表了一个迄今未描述的物种,属于该属的一个亚分支。该新物种具有耐渗透压性,能够形成侵袭性假菌丝,但不形成孢子。为此新物种提议命名为f.a.(无性型)。保存在代谢不活跃状态的模式标本为CBS 12960(模式外培养物:2-1361和CCY 90-2-1,NCAIM Y.02123)。条形码序列的GenBank登录号为JX515983(D1/D2结构域)、JX515985(ITS1-5.8S-ITS2和部分18S rRNA基因)、PQ613837(部分序列)和PQ613838(部分序列)。MycoBank编号:MB855459。对该属物种模式菌株的D1/D2和内转录间隔区(ITS)序列分析发现了多个多核苷酸插入缺失,可作为分类标记(InDel标记)。各亚分支的插入缺失模式差异很大,且在亚分支内具有一致性。这一结果强化了先前研究中提出但又被反驳的观点,即这些亚分支可能代表不同的属。

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