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微生物群和代谢产物在脐带间充质干细胞治疗肺纤维化中的作用:整合粪便代谢组学和16S rDNA分析

The role of the microbiota and metabolites in the treatment of pulmonary fibrosis with UC-MSCs: Integrating fecal metabolomics and 16S rDNA analysis.

作者信息

Luo Yukai, Zhou Shuang, Zhang Xiaojing, Lin Yijian, Liu Jun, Cheng Wenzhao, Zeng Yiming

机构信息

Fujian Key Laboratory of Lung Stem Cells, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, Fujian, China.

The Second Clinical Medical School of Fujian Medical University, Quanzhou, Fujian, China.

出版信息

PLoS One. 2025 Jan 9;20(1):e0313989. doi: 10.1371/journal.pone.0313989. eCollection 2025.

Abstract

INTRODUCTION

Pulmonary fibrosis (PF) is a chronic and irreversible interstitial lung disease characterized by a lack of effective therapies. Mesenchymal stem cells (MSCs) have garnered significant interest in the realm of lung regeneration due to their abundant availability, ease of isolation, and capacity for expansion. The objective of our study was to investigate the potential therapeutic role of umbilical cord-derived MSCs (UC-MSCs) in the management of PF, with a focus on the alterations in the gut microbiota and its metabolites during the use of UC-MSCs for the treatment of pulmonary fibrosis, as well as the possible mechanisms involved.

METHODS

Bleomycin injection was utilized to establish a mouse model of lung fibrosis, followed by the application of 16S rDNA sequencing and LC-MS/MS metabolomics to explore the underlying mechanism of UC-MSC treatment for lung fibrosis. Seventy-five mice were allocated into five groups, namely Control, Model, and low/medium/high dose of UC-MSCs groups, and survival metrics, lung morphology, and the levels of the inflammatory cytokines TNF-α, IL-1β, IL-6, and TGF-β1 were subsequently evaluated. Fecal samples from six mice in each of the Control group, Model group, and UC-MSCs-M groups were collected randomly for 16S rDNA sequencing to analyze the gut microbiota and nontargeted metabolomics.

RESULTS

In comparison to IPF model mice, the three treatment groups exhibited increased survival rates, restored alveolar morphology, and reduced levels of the inflammatory cytokines TNF-α, IL-1β, IL-6, and TGF-β1, confirming the anti-inflammatory properties of UC-MSCs in IPF treatment. The findings from the 16S rDNA assay indicate that UC-MSCs treatment effectively lower α-diversity induced such as Chao 1 and ACE, as well as β-diversity, leading to a decrease in microbiota abundance. The findings from the metabolomics analysis revealed that the metabolites exhibiting notable variances were primarily composed of Lipids and lipid-like molecules, Organoheterocyclic compounds, Organic acids and derivatives, and Benzenoids, indicating the potential of UC-MSCs to exert antifibrotic effects via these metabolic pathways.

CONCLUSION

Umbilical cord-derived mesenchymal stem cells (UC-MSCs) ameliorate bleomycin-induced pulmonary fibrosis symptoms in mice by exerting anti-inflammatory effects and mitigating pulmonary fibrosis through the modulation of gut microbiota disorders and their metabolism. These findings offer novel insights into the potential mechanisms and clinical utility of stem cell therapy for pulmonary fibrosis.

摘要

引言

肺纤维化(PF)是一种慢性且不可逆的间质性肺病,缺乏有效的治疗方法。间充质干细胞(MSCs)因其来源丰富、易于分离和扩增能力,在肺再生领域引起了广泛关注。本研究的目的是探讨脐带间充质干细胞(UC-MSCs)在PF治疗中的潜在治疗作用,重点关注UC-MSCs治疗肺纤维化过程中肠道微生物群及其代谢产物的变化以及可能涉及的机制。

方法

采用博来霉素注射建立小鼠肺纤维化模型,随后应用16S rDNA测序和液相色谱-质谱联用(LC-MS/MS)代谢组学技术探索UC-MSCs治疗肺纤维化的潜在机制。将75只小鼠分为五组,即对照组、模型组以及低/中/高剂量UC-MSCs组,随后评估生存指标、肺形态以及炎性细胞因子TNF-α、IL-1β、IL-6和TGF-β1的水平。从对照组、模型组和UC-MSCs-M组中每组随机选取6只小鼠的粪便样本进行16S rDNA测序,以分析肠道微生物群和非靶向代谢组学。

结果

与特发性肺纤维化(IPF)模型小鼠相比,三个治疗组的生存率提高,肺泡形态恢复,炎性细胞因子TNF-α、IL-1β、IL-6和TGF-β1水平降低,证实了UC-MSCs在IPF治疗中的抗炎特性。16S rDNA检测结果表明,UC-MSCs治疗可有效降低如Chao 1和ACE等诱导的α多样性以及β多样性,导致微生物群丰度降低。代谢组学分析结果显示,表现出显著差异的代谢产物主要由脂质和类脂分子、有机杂环化合物、有机酸及其衍生物和苯类化合物组成,表明UC-MSCs具有通过这些代谢途径发挥抗纤维化作用 的潜力。

结论

脐带间充质干细胞(UC-MSCs)通过发挥抗炎作用以及调节肠道微生物群紊乱及其代谢来减轻肺纤维化,从而改善博来霉素诱导的小鼠肺纤维化症状。这些发现为干细胞治疗肺纤维化的潜在机制和临床应用提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2720/11717254/01d749374510/pone.0313989.g001.jpg

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