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果实抗高尿酸血症的潜在机制:网络药理学、分子对接、分子动力学模拟与体外实验的整合

The Potential Mechanism of Fructus Against Hyperuricemia: An Integration of Network Pharmacology, Molecular Docking, Molecular Dynamics Simulation, and In Vitro Experiments.

作者信息

Zhang Shuanggou, Yang Yuanfei, Zhang Ruohan, Gao Jian, Wu Mengyun, Wang Jing, Sheng Jun, Sun Peiyuan

机构信息

Key Laboratory of Pu-er Tea Science, Ministry of Education, Yunnan Agricultural University, Kunming 650201, China.

College of Food Science and Technology, Yunnan Agricultural University, Kunming 650201, China.

出版信息

Nutrients. 2024 Dec 28;17(1):71. doi: 10.3390/nu17010071.

DOI:10.3390/nu17010071
PMID:39796505
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11723258/
Abstract

: Fructus (AOF) is a medicinal and edible resource that holds potential to ameliorate hyperuricemia (HUA), yet its mechanism of action warrants further investigation. : We performed network pharmacology, molecular docking, molecular dynamics simulation, and in vitro experiments to investigate the potential action and mechanism of AOF against HUA. : The results indicate that 48 potential anti-HUA targets for 4 components derived from AOF were excavated and predicted through public databases. Gene Ontology (GO) enrichment analysis indicated that there are 190 entries related to biological process, 24 entries related to cellular component, 42 entries related to molecular function, and 44 entries related to Kyoto Encyclopedia of Genes and Genomes (KEGG) signaling pathways. The results of molecular docking showed that the main active ingredients of AOF may have potential therapeutic effects on immune system disorders and inflammation caused by HUA by binding to targets including peroxisome-proliferator-activated receptor gamma (PPARG), estrogen receptor 1 (ESR1), prostaglandin G/H synthase 2 (PTGS2), and 3-hydroxy-3-methylglutaryl-coenzyme A reductase (HMGCR). Subsequently, we further determined the stability of the complex between the core active ingredient and the core target proteins by molecular dynamics simulation. The results of cell experiments demonstrated that stigmasterol as the core active ingredient derived from AOF significantly upregulated the expression levels of ESR1 and PPARG ( < 0.001) to exert an anti-HUA effect. : In summary, we have systematically elucidated that the mechanism of main active ingredients derived from AOF mainly exert their pharmacological effects by acting on multiple targets in this study. Our studies will provide a scientific basis for the precise development and utilization of AOF.

摘要

火麻仁果实(AOF)是一种药食同源资源,具有改善高尿酸血症(HUA)的潜力,但其作用机制仍需进一步研究。我们通过网络药理学、分子对接、分子动力学模拟和体外实验来研究AOF抗HUA的潜在作用及机制。结果表明,通过公共数据库挖掘并预测了AOF中4种成分的48个潜在抗HUA靶点。基因本体论(GO)富集分析表明,有190个条目与生物过程相关,24个条目与细胞成分相关,42个条目与分子功能相关,44个条目与京都基因与基因组百科全书(KEGG)信号通路相关。分子对接结果显示,AOF的主要活性成分可能通过与过氧化物酶体增殖物激活受体γ(PPARG)、雌激素受体1(ESR1)、前列腺素G/H合酶2(PTGS2)和3-羟基-3-甲基戊二酰辅酶A还原酶(HMGCR)等靶点结合,对HUA引起的免疫系统紊乱和炎症具有潜在治疗作用。随后,我们通过分子动力学模拟进一步确定了核心活性成分与核心靶蛋白之间复合物的稳定性。细胞实验结果表明,作为AOF核心活性成分的豆甾醇显著上调了ESR1和PPARG的表达水平(<0.001),从而发挥抗HUA作用。综上所述,我们在本研究中系统阐明了AOF主要活性成分的作用机制主要是通过作用于多个靶点发挥药理作用。我们的研究将为AOF的精准开发利用提供科学依据。

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