Zhao Hongyang, Lan Beiwu, Zhao Zenghui, Zhu Peining, Wang Chong, Gao Yufei
Department of Neurosurgery, China-Japan Union Hospital of Jilin University, Changchun, 130033, Jilin, China.
Jilin Province Neuro-oncology Engineering Laboratory, Changchun, 130033, Jilin, China.
Discov Oncol. 2025 Jan 11;16(1):32. doi: 10.1007/s12672-025-01786-y.
Nucleotide-binding oligomerization domain protein 1 (NOD1) is one of the innate immune receptors that has been associated with tumorigenesis and abnormally expressed in various cancers. However, the role of NOD1 in Glioblastoma Multiforme (GBM) has not been investigated. We used the Tumor Immune Estimate Resource (TIMER) database to compare the differential expression of NOD1 in various tumors. NOD1 expression in GBM was further validated in the GEO database, and the survival of NOD1 was assessed by the Kaplan-Meier method. Clinical samples were collected to validate NOD1 expression. GSEA was carried out to expound on NOD1-related pathways involved in GBM. NOD1 co-expression and enrichment analysis were performed using the Linked Omics database and R software. The relationship between immune infiltrates and NOD1 expression was assessed by TIMER. Besides, the correlation between NOD1 and immune signatures (immunomodulators and chemokine) was evaluated by TISIDB. We found that NOD1 expression was significantly upregulated in GBM patients, and higher expression of NOD1 was associated with a poor prognosis. GSEA and enrichment analysis revealed that NOD1 might play a vital role in immune response and GBM progression. TIMER analysis showed a positive correlation between NOD1 expression and 17 types of tumor-infiltrating immune cells. Moreover, NOD1 expression was positively correlated with the expression of chemokine and immunomodulators in GBM. Overall, our findings suggest that NOD1 is a promising prognostic biomarker and is associated with immune cell infiltration in GBM, making it a potential diagnostic biomarker for this aggressive brain cancer.
核苷酸结合寡聚化结构域蛋白1(NOD1)是一种天然免疫受体,与肿瘤发生相关且在多种癌症中异常表达。然而,NOD1在多形性胶质母细胞瘤(GBM)中的作用尚未得到研究。我们使用肿瘤免疫评估资源(TIMER)数据库比较NOD1在各种肿瘤中的差异表达。在GEO数据库中进一步验证了GBM中NOD1的表达,并通过Kaplan-Meier方法评估NOD1的生存情况。收集临床样本以验证NOD1的表达。进行基因集富集分析(GSEA)以阐述GBM中涉及的NOD1相关通路。使用Linked Omics数据库和R软件进行NOD1共表达和富集分析。通过TIMER评估免疫浸润与NOD1表达之间的关系。此外,通过TISIDB评估NOD1与免疫特征(免疫调节剂和趋化因子)之间的相关性。我们发现GBM患者中NOD1表达显著上调,且NOD1的高表达与预后不良相关。GSEA和富集分析表明,NOD1可能在免疫反应和GBM进展中起重要作用。TIMER分析显示NOD1表达与17种肿瘤浸润免疫细胞呈正相关。此外,GBM中NOD1表达与趋化因子和免疫调节剂的表达呈正相关。总体而言,我们的研究结果表明,NOD1是一种有前景的预后生物标志物,与GBM中的免疫细胞浸润相关,使其成为这种侵袭性脑癌的潜在诊断生物标志物。