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利用DNA多态性作为表型标记对秀丽隐杆线虫胶原蛋白基因进行遗传图谱绘制。

Genetic mapping of Caenorhabditis elegans collagen genes using DNA polymorphisms as phenotypic markers.

作者信息

Cox G N, Carr S, Kramer J M, Hirsh D

出版信息

Genetics. 1985 Mar;109(3):513-28. doi: 10.1093/genetics/109.3.513.

DOI:10.1093/genetics/109.3.513
PMID:3979813
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1216285/
Abstract

In Caenorhabditis elegans collagens comprise a dispersed family of 40-150 genes, the majority of which probably code for collagen proteins found in the animal's cuticle. The conserved (Gly-X-Y)n triple helix coding sequence of collagen genes has facilitated the isolation of a large number of C. elegans collagen genes by recombinant DNA methods. We have begun a study of the chromosomal organization of these genes by screening laboratory strains of C. elegans for DNA polymorphisms in the regions surrounding collagen genes. Polymorphisms near seven genes have been identified and have been used as phenotypic markers in genetic crosses to assign the genes to linkage groups II, III, IV, and X. Four genes are shown by multifactor crosses to map to a 2-3 map unit interval between unc-24 and unc-22 on chromosome IV.

摘要

在秀丽隐杆线虫中,胶原蛋白由一个包含40 - 150个基因的分散家族组成,其中大多数基因可能编码动物角质层中发现的胶原蛋白。胶原蛋白基因保守的(甘氨酸 - X - 酪氨酸)n三螺旋编码序列,通过重组DNA方法促进了大量秀丽隐杆线虫胶原蛋白基因的分离。我们已经开始通过筛选秀丽隐杆线虫实验室菌株中胶原蛋白基因周围区域的DNA多态性,来研究这些基因的染色体组织。已经鉴定出七个基因附近的多态性,并将其用作遗传杂交中的表型标记,以将这些基因分配到连锁群II、III、IV和X。通过多因素杂交显示,四个基因定位于染色体IV上unc - 24和unc - 22之间2 - 3个图距单位的区间。

相似文献

1
Genetic mapping of Caenorhabditis elegans collagen genes using DNA polymorphisms as phenotypic markers.利用DNA多态性作为表型标记对秀丽隐杆线虫胶原蛋白基因进行遗传图谱绘制。
Genetics. 1985 Mar;109(3):513-28. doi: 10.1093/genetics/109.3.513.
2
Cuticle collagen genes of Haemonchus contortus and Caenorhabditis elegans are highly conserved.捻转血矛线虫和秀丽隐杆线虫的角质层胶原蛋白基因高度保守。
Mol Biochem Parasitol. 1989 Nov;37(1):73-85. doi: 10.1016/0166-6851(89)90104-7.
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Conservation of the Caenorhabditis elegans cuticle collagen gene col-12 in Caenorhabditis briggsae.秀丽隐杆线虫的表皮胶原蛋白基因col-12在briggsae秀丽隐杆线虫中的保守性。
Gene. 1997 Jul 9;193(2):181-6. doi: 10.1016/s0378-1119(97)00112-1.
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Actin gene family of Caenorhabditis elegans.秀丽隐杆线虫的肌动蛋白基因家族。
J Mol Biol. 1983 Mar 5;164(3):355-75. doi: 10.1016/0022-2836(83)90056-6.
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The Caenorhabditis elegans rol-6 gene, which interacts with the sqt-1 collagen gene to determine organismal morphology, encodes a collagen.秀丽隐杆线虫的rol-6基因与sqt-1胶原蛋白基因相互作用以决定生物体形态,该基因编码一种胶原蛋白。
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Genetic studies of unusual loci that affect body shape of the nematode Caenorhabditis elegans and may code for cuticle structural proteins.对线虫秀丽隐杆线虫身体形状有影响且可能编码表皮结构蛋白的异常基因座的遗传学研究。
Genetics. 1986 Jul;113(3):621-39. doi: 10.1093/genetics/113.3.621.
7
Number and organization of collagen genes in Caenorhabditis elegans.秀丽隐杆线虫中胶原蛋白基因的数量与组织方式。
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8
Isolation and mapping of DNA probes within the linkage group I gene cluster of Caenorhabditis elegans.秀丽隐杆线虫连锁群I基因簇内DNA探针的分离与定位
Genome. 1989 Jun;32(3):365-72. doi: 10.1139/g89-456.
9
The two Caenorhabditis elegans basement membrane (type IV) collagen genes are located on separate chromosomes.两种秀丽隐杆线虫基底膜(IV型)胶原蛋白基因位于不同的染色体上。
J Biol Chem. 1989 Oct 15;264(29):17574-82.
10
Comparisons of the complete sequences of two collagen genes from Caenorhabditis elegans.秀丽隐杆线虫两个胶原蛋白基因完整序列的比较。
Cell. 1982 Sep;30(2):599-606. doi: 10.1016/0092-8674(82)90256-2.

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DBL-1, a TGF-β, is essential for Caenorhabditis elegans aversive olfactory learning.DBL-1,一种 TGF-β,对于秀丽隐杆线虫的厌恶嗅觉学习是必不可少的。
Proc Natl Acad Sci U S A. 2012 Oct 16;109(42):17081-6. doi: 10.1073/pnas.1205982109. Epub 2012 Sep 26.
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Toward a physical map of the genome of the nematode Caenorhabditis elegans.构建秀丽隐杆线虫基因组物理图谱。
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dpy-18 encodes an alpha-subunit of prolyl-4-hydroxylase in caenorhabditis elegans.dpy-18在秀丽隐杆线虫中编码脯氨酰-4-羟化酶的α亚基。
Genetics. 2000 Jul;155(3):1139-48. doi: 10.1093/genetics/155.3.1139.
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Analysis of mutations in the sqt-1 and rol-6 collagen genes of Caenorhabditis elegans.秀丽隐杆线虫sqt-1和rol-6胶原蛋白基因突变分析。
Genetics. 1993 Dec;135(4):1035-45. doi: 10.1093/genetics/135.4.1035.
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Molecular and genetic analyses of the Caenorhabditis elegans dpy-2 and dpy-10 collagen genes: a variety of molecular alterations affect organismal morphology.秀丽隐杆线虫dpy-2和dpy-10胶原蛋白基因的分子与遗传分析:多种分子改变影响生物体形态。
Mol Biol Cell. 1993 Aug;4(8):803-17. doi: 10.1091/mbc.4.8.803.
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Genetic studies of unusual loci that affect body shape of the nematode Caenorhabditis elegans and may code for cuticle structural proteins.对线虫秀丽隐杆线虫身体形状有影响且可能编码表皮结构蛋白的异常基因座的遗传学研究。
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10
Molecular and genetic analyses of a multivariate system specifying behavior and life span.
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本文引用的文献

1
Genetic and Phenotypic Characterization of Roller Mutants of CAENORHABDITIS ELEGANS.秀丽隐杆线虫 Roller 突变体的遗传和表型特征。
Genetics. 1980 Jun;95(2):317-39. doi: 10.1093/genetics/95.2.317.
2
Comparisons of the complete sequences of two collagen genes from Caenorhabditis elegans.秀丽隐杆线虫两个胶原蛋白基因完整序列的比较。
Cell. 1982 Sep;30(2):599-606. doi: 10.1016/0092-8674(82)90256-2.
3
Number and organization of collagen genes in Caenorhabditis elegans.秀丽隐杆线虫中胶原蛋白基因的数量与组织方式。
Mol Cell Biol. 1984 Nov;4(11):2389-95. doi: 10.1128/mcb.4.11.2389-2395.1984.
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Sequence of the C. elegans transposable element Tc1.秀丽隐杆线虫转座元件Tc1的序列。
Nucleic Acids Res. 1983 Jun 25;11(12):4201-9. doi: 10.1093/nar/11.12.4201.
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Analysis of a transposable element in Caenorhabditis elegans.秀丽隐杆线虫中一种转座元件的分析。
Proc Natl Acad Sci U S A. 1983 Jun;80(12):3585-9. doi: 10.1073/pnas.80.12.3585.
6
Evidence for a transposon in Caenorhabditis elegans.秀丽隐杆线虫中转座子的证据。
Cell. 1983 Jan;32(1):55-65. doi: 10.1016/0092-8674(83)90496-8.
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Structurally distinct collagen types.结构不同的胶原类型。
Annu Rev Biochem. 1980;49:957-1003. doi: 10.1146/annurev.bi.49.070180.004521.
8
Nature of Col E 1 plasmid replication in Escherichia coli in the presence of the chloramphenicol.氯霉素存在下大肠杆菌中Col E 1质粒复制的性质
J Bacteriol. 1972 May;110(2):667-76. doi: 10.1128/jb.110.2.667-676.1972.
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The genetics of bacterial ribosomes.细菌核糖体的遗传学
Annu Rev Genet. 1972;6:203-34. doi: 10.1146/annurev.ge.06.120172.001223.
10
Identification of the structural gene for a myosin heavy-chain in Caenorhabditis elegans.秀丽隐杆线虫中肌球蛋白重链结构基因的鉴定。
J Mol Biol. 1977 Jul;114(1):133-40. doi: 10.1016/0022-2836(77)90287-x.