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口腔和粪便微生物群作为中国人群中检测胰腺癌的准确非侵入性工具。

Oral and fecal microbiota as accurate non-invasive tools for detection of pancreatic cancer in the Chinese population.

作者信息

Li Pengyu, Zhang Hanyu, Chen Lixin, Gao Xingyu, Hu Ya, Xu Qiang, Liu Wenjing, Chen Weijie, Chen Haomin, Yuan Shuai, Wang Mingfei, Liu Shili, Dai Menghua

机构信息

Department of General Surgery, Peking Union Medical College, Chinese Academy of Medical Sciences, Peking Union Medical College Hospital, No.1 Shuaifuyuan, Wangfujing, Dongcheng District, Beijing, 100730, China.

Department of Medical Microbiology, School of Basic Medical Sciences, Cheelo College of Medicine, Shandong University, No.44 Wenhuaxi Road, Lixia District, Jinan, Shandong, 250012, China.

出版信息

Cancer Lett. 2025 Mar 1;612:217456. doi: 10.1016/j.canlet.2025.217456. Epub 2025 Jan 10.

Abstract

Pancreatic cancer (PCA), a leading cause of cancer-related deaths, has limited non-invasive diagnostic methods. We aimed to identify oral and fecal microbiome biomarkers and construct diagnostic classifiers. Oral and fecal samples from 97 PCA patients and 90 healthy controls underwent 16S rRNA sequencing. Samples were randomly divided into training and validation cohorts in a 7:3 ratio. Random forest models were constructed using training cohort and validated internally and externally in Chinese, Japanese, and Spanish populations. Results revealed significant dysbiosis of the oral and fecal microbiota of PCA patients. Most of the differential taxa shared between oral and fecal samples showed similar changes. Relative abundances of Streptococcus in oral samples, and of Bifidobacterium, Klebsiella and Akkermansia in fecal samples, were enriched in PCA. The fecal Firmicutes to Bacteroidota ratio was higher in PCA patient samples. Oral and fecal microbiome classifiers based on the top 20 contributing genera were constructed, and internal validation showed that the area under the curve (AUC) values were 0.963 and 0.890, respectively. The fecal microbiome classifier performed well in the external Chinese population, with an AUC of 0.878, but poorly in the Japanese and Spanish populations. Furthermore, fecal microbiomes could predict metastasis status in PCA patients, with an AUC of 0.804. In conclusion, oral and fecal microbiota were dysbiotic in PCA patients. Fecal microbiome classifier provides a feasible, non-invasive, and cost-effective tool with high precision for PCA screening in China; oral microbiome classifier requires further validation in external populations sampled with the same simple and convenient methods.

摘要

胰腺癌(PCA)是癌症相关死亡的主要原因之一,其非侵入性诊断方法有限。我们旨在识别口腔和粪便微生物组生物标志物并构建诊断分类器。对97例PCA患者和90例健康对照的口腔和粪便样本进行16S rRNA测序。样本以7:3的比例随机分为训练队列和验证队列。使用训练队列构建随机森林模型,并在中国、日本和西班牙人群中进行内部和外部验证。结果显示PCA患者口腔和粪便微生物群存在明显的生态失调。口腔和粪便样本中大多数差异分类群显示出相似的变化。PCA患者口腔样本中链球菌的相对丰度以及粪便样本中双歧杆菌、克雷伯菌和阿克曼氏菌的相对丰度增加。PCA患者样本中粪便厚壁菌门与拟杆菌门的比例更高。基于前20个贡献属构建了口腔和粪便微生物组分类器,内部验证显示曲线下面积(AUC)值分别为0.963和0.890。粪便微生物组分类器在中国外部人群中表现良好,AUC为0.878,但在日本和西班牙人群中表现不佳。此外,粪便微生物组可以预测PCA患者的转移状态,AUC为0.804。总之,PCA患者的口腔和粪便微生物群存在生态失调。粪便微生物组分类器为中国的PCA筛查提供了一种可行、非侵入性且具有成本效益的高精度工具;口腔微生物组分类器需要在采用相同简单便捷方法采集的外部人群中进一步验证。

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