Chen Xingxuan, Shang Yu, Shen Danting, Shi Si, Wen Zhe, Li Lijuan, Chen Hong
Department of Pulmonary and Critical Care Medicine, The Second Affiliated Hospital of Harbin Medical University, Harbin, 150086, China.
Department of Respiratory Medicine, The Second Hospital of Heilongjiang Province, Harbin, 150001, China.
Respir Res. 2025 Jan 13;26(1):16. doi: 10.1186/s12931-024-03086-5.
The emergence of new molecular targeted drugs marks a breakthrough in asthma treatment, particularly for severe cases. Yet, options for moderate-to-severe asthma treatment remain limited, highlighting the urgent need for novel therapeutic drug targets. In this study, we aimed to identify new treatment targets for asthma using the Mendelian randomization method and large-scale genome-wide association data (GWAS).
We utilized GWAS data from the UK Biobank (comprising 56,167 patients and 352,255 control subjects) and the FinnGen cohort (including 23,834 patients and 228,085 control subjects). Genetic instruments for 734 plasma proteins and 154 cerebrospinal fluid proteins were derived from recently published GWAS. Bidirectional Mendelian randomization analysis, Steiger filtering, colocalization, and phenotype scanning were employed for reverse causal inference detection, further substantiating the Mendelian randomization results. A protein-protein interaction network was also constructed to reveal potential associations between proteins and asthma medications.
Under Bonferroni significance conditions, Mendelian randomization analysis revealed causal relationships between seven proteins and asthma. In plasma, we observed that an increase of one standard deviation in IL1R1[1.30 (95% CI 1.20-1.42)], IL7R[1.07 (95% CI 1.04-1.11)], ECM1[1.03 (95% CI 1.02-1.05)], and CD200R1[1.18 (95% CI 1.09-1.27)] were associated with an increased risk of asthma, while an increase in ADAM19 [0.87 (95% CI 0.82-0.92)] was found to be protective. In the brain, each 10-fold increase in IL-6 sRa [1.29 (95% CI 1.15-1.45)] was associated with an increased risk of asthma, while an increase in Layilin [0.61 (95% CI 0.51-0.73)] was found to be protective. None of the seven proteins exhibited a reverse causal relationship. Colocalization analysis indicated that ECM1 (coloc.abf-PPH4 = 0.953), IL-6 sRa (coloc.abf-PPH4 = 0.966), and layilin (coloc.abf-PPH4 = 0.975) shared the same genetic variation as in asthma.
A causal relationship exists between genetically determined protein levels of IL1R1, IL7R, ECM1, CD200R1, ADAM19, IL-6 sRa, and Layilin (LAYN) and asthma. Moreover, the identified proteins may serve as attractive drug targets for asthma, especially ECM1 and Layilin (LAYN). However, further research is required to comprehensively understand the roles of these proteins in the occurrence and progression of asthma.
新型分子靶向药物的出现标志着哮喘治疗取得了突破,尤其是对于重症病例。然而,中重度哮喘的治疗选择仍然有限,凸显了对新型治疗药物靶点的迫切需求。在本研究中,我们旨在使用孟德尔随机化方法和大规模全基因组关联数据(GWAS)来确定哮喘的新治疗靶点。
我们利用了英国生物银行的GWAS数据(包括56167例患者和352255例对照)以及芬兰基因队列(包括23834例患者和228085例对照)。734种血浆蛋白和154种脑脊液蛋白的遗传工具来自最近发表的GWAS。采用双向孟德尔随机化分析、斯泰格过滤、共定位和表型扫描进行反向因果推断检测,进一步证实孟德尔随机化结果。还构建了蛋白质-蛋白质相互作用网络,以揭示蛋白质与哮喘药物之间的潜在关联。
在Bonferroni显著性条件下,孟德尔随机化分析揭示了7种蛋白质与哮喘之间的因果关系。在血浆中,我们观察到IL1R1[1.30(95%CI 1.20 - 1.42)]、IL7R[1.07(95%CI 1.04 - 1.11)]、ECM1[1.03(95%CI 1.02 - 1.05)]和CD200R1[1.18(95%CI 1.09 - 1.27)]每增加一个标准差与哮喘风险增加相关,而ADAM19增加[0.87(95%CI 0.82 - 0.92)]具有保护作用。在大脑中,IL - 6 sRa每增加10倍[1.29(95%CI 1.15 - 1.45)]与哮喘风险增加相关,而Layilin增加[0.61(95%CI 0.51 - 0.73)]具有保护作用。这7种蛋白质均未表现出反向因果关系。共定位分析表明,ECM1(coloc.abf - PPH4 = 0.953)、IL - 6 sRa(coloc.abf - PPH4 = 0.966)和Layilin(coloc.abf - PPH4 = 0.975)与哮喘共享相同的遗传变异。
IL1R1、IL7R、ECM1、CD200R1、ADAM19、IL - 6 sRa和Layilin(LAYN)的基因决定蛋白水平与哮喘之间存在因果关系。此外,所确定的蛋白质可能是有吸引力的哮喘药物靶点,尤其是ECM1和Layilin(LAYN)。然而,需要进一步研究以全面了解这些蛋白质在哮喘发生和发展中的作用。