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使用[32P]DNA探针的斑点印迹法用于灵敏检测植物中的鳄梨日斑病和其他类病毒。

Dot-blot procedure with [32P]DNA probes for the sensitive detection of avocado sunblotch and other viroids in plants.

作者信息

Barker J M, McInnes J L, Murphy P J, Symons R H

出版信息

J Virol Methods. 1985 Feb;10(2):87-98. doi: 10.1016/0166-0934(85)90094-1.

DOI:10.1016/0166-0934(85)90094-1
PMID:3980666
Abstract

Avocado sunblotch viroid (ASBV) has been detected down to a level of about 20 pg per gram fresh weight of leaves by the use of a dot-blot hybridization procedure and partially purified nucleic acid extracts. Three [32P]DNA probes were compared, two prepared from full-length ASBV clones in the single-strand M13mp93 vector and the other by primer extension on purified ASBV. All three probes gave the same sensitivity of detection of ASBV. The methods developed have also been used successfully for the routine detection of potato spindle tuber viroid, citrus exocortis viroid, and coconut cadang cadang viroid.

摘要

利用斑点杂交程序和部分纯化的核酸提取物,已检测到鳄梨日斑类病毒(ASBV)在叶片鲜重每克约20皮克的水平。比较了三种[32P]DNA探针,两种由单链M13mp93载体中的全长ASBV克隆制备,另一种通过对纯化的ASBV进行引物延伸制备。所有三种探针检测ASBV的灵敏度相同。所开发的方法也已成功用于马铃薯纺锤块茎类病毒、柑橘裂皮类病毒和椰子死亡类病毒的常规检测。

相似文献

1
Dot-blot procedure with [32P]DNA probes for the sensitive detection of avocado sunblotch and other viroids in plants.使用[32P]DNA探针的斑点印迹法用于灵敏检测植物中的鳄梨日斑病和其他类病毒。
J Virol Methods. 1985 Feb;10(2):87-98. doi: 10.1016/0166-0934(85)90094-1.
2
Nonradioactive, photobiotin-labelled DNA probes for routine diagnosis of viroids in plant extracts.用于植物提取物中类病毒常规诊断的非放射性、光生物素标记的DNA探针。
J Virol Methods. 1989 Mar;23(3):299-312. doi: 10.1016/0166-0934(89)90162-6.
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Avocado sunblotch viroid: primary sequence and proposed secondary structure.鳄梨日斑类病毒:一级序列和推测的二级结构
Nucleic Acids Res. 1981 Dec 11;9(23):6527-37. doi: 10.1093/nar/9.23.6527.
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Comparative sequence studies of variants of avocado sunblotch viroid.鳄梨日斑类病毒变异体的比较序列研究
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Characterization of RNAs specific to avocado sunblotch viroid synthesized in vitro by a cell-free system from infected avocado leaves.利用来自感染鳄梨叶片的无细胞系统体外合成的鳄梨日斑类病毒特异性RNA的特性分析
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Comparison of multimeric plus and minus forms of viroids and virusoids.类病毒和拟病毒的多聚体正负形式的比较。
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In vitro 32P-labelling of viroid RNA for hybridization studies.用于杂交研究的类病毒RNA的体外32P标记
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A novel aspect of the information content of viroids.类病毒信息内容的一个新方面。
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Stiffness of viroids and viroid-like RNA in solution.溶液中类病毒和类病毒样RNA的刚性
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引用本文的文献

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Micromachines (Basel). 2023 Feb 10;14(2):427. doi: 10.3390/mi14020427.
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Comparison of multimeric plus and minus forms of viroids and virusoids.类病毒和拟病毒的多聚体正负形式的比较。
Plant Mol Biol. 1985 Sep;4(5):293-304. doi: 10.1007/BF02418248.
3
Site-specific mutagenesis of potato spindle tuber viroid cDNA: : Alterations within premelting region 2 that abolish infectivity.马铃薯纺锤块茎类病毒 cDNA 的定点突变:在预熔解区 2 内的改变导致丧失感染性。
Plant Mol Biol. 1986 May;6(3):179-92. doi: 10.1007/BF00021487.
4
Characterization of repetitive elements in several Cucurbita species.几种南瓜属植物中重复元件的特征。
Plant Mol Biol. 1987 Nov;8(6):497-507. doi: 10.1007/BF00017995.
5
Mutational analysis of potato spindle tuber viroid reveals complex relationships between structure and infectivity.马铃薯纺锤块茎类病毒突变分析揭示了结构与感染性之间的复杂关系。
Proc Natl Acad Sci U S A. 1987 Jun;84(12):3967-71. doi: 10.1073/pnas.84.12.3967.
6
Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid.鳄梨日斑类病毒正链和负链RNA转录本的自我切割
Nucleic Acids Res. 1986 May 12;14(9):3627-40. doi: 10.1093/nar/14.9.3627.
7
DNA probes for clinical applications. Patents and literature.用于临床应用的DNA探针。专利与文献。
Appl Biochem Biotechnol. 1986 Jun;12(3):301-10. doi: 10.1007/BF02798426.
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Sequence variability in avocado sunblotch viroid (ASBV).鳄梨日斑类病毒(ASBV)的序列变异性
Nucleic Acids Res. 1988 Oct 25;16(20):9864. doi: 10.1093/nar/16.20.9864.
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Vesicular stomatitis virus in Drosophila melanogaster cells: regulation of viral transcription and replication.黑腹果蝇细胞中的水泡性口炎病毒:病毒转录与复制的调控
J Virol. 1988 Jan;62(1):277-84. doi: 10.1128/JVI.62.1.277-284.1988.