• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

化学领域中大型语言模型与自主智能体的综述。

A review of large language models and autonomous agents in chemistry.

作者信息

Ramos Mayk Caldas, Collison Christopher J, White Andrew D

机构信息

FutureHouse Inc. San Francisco CA USA

Department of Chemical Engineering, University of Rochester Rochester NY USA

出版信息

Chem Sci. 2024 Dec 9;16(6):2514-2572. doi: 10.1039/d4sc03921a. eCollection 2025 Feb 5.

DOI:10.1039/d4sc03921a
PMID:39829984
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11739813/
Abstract

Large language models (LLMs) have emerged as powerful tools in chemistry, significantly impacting molecule design, property prediction, and synthesis optimization. This review highlights LLM capabilities in these domains and their potential to accelerate scientific discovery through automation. We also review LLM-based autonomous agents: LLMs with a broader set of tools to interact with their surrounding environment. These agents perform diverse tasks such as paper scraping, interfacing with automated laboratories, and synthesis planning. As agents are an emerging topic, we extend the scope of our review of agents beyond chemistry and discuss across any scientific domains. This review covers the recent history, current capabilities, and design of LLMs and autonomous agents, addressing specific challenges, opportunities, and future directions in chemistry. Key challenges include data quality and integration, model interpretability, and the need for standard benchmarks, while future directions point towards more sophisticated multi-modal agents and enhanced collaboration between agents and experimental methods. Due to the quick pace of this field, a repository has been built to keep track of the latest studies: https://github.com/ur-whitelab/LLMs-in-science.

摘要

大语言模型(LLMs)已成为化学领域的强大工具,对分子设计、性质预测和合成优化产生了重大影响。本综述重点介绍了大语言模型在这些领域的能力,以及它们通过自动化加速科学发现的潜力。我们还回顾了基于大语言模型的自主智能体:即拥有更广泛工具集以与周围环境交互的大语言模型。这些智能体执行各种任务,如文献抓取、与自动化实验室对接以及合成规划。由于智能体是一个新兴主题,我们将对智能体的综述范围扩展到化学领域之外,并在任何科学领域进行讨论。本综述涵盖了大语言模型和自主智能体的近期发展历程、当前能力及设计,探讨了化学领域的特定挑战、机遇和未来发展方向。关键挑战包括数据质量与整合、模型可解释性以及对标准基准的需求,而未来发展方向则指向更复杂的多模态智能体以及智能体与实验方法之间加强协作。鉴于该领域发展迅速,已建立一个知识库来跟踪最新研究:https://github.com/ur-whitelab/LLMs-in-science 。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/692c34d5da20/d4sc03921a-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/a4da05696a82/d4sc03921a-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/8ccd295a9043/d4sc03921a-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/f070714acf0e/d4sc03921a-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/0ef96ffa908d/d4sc03921a-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/eade0680c0c4/d4sc03921a-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/692c34d5da20/d4sc03921a-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/a4da05696a82/d4sc03921a-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/8ccd295a9043/d4sc03921a-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/f070714acf0e/d4sc03921a-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/0ef96ffa908d/d4sc03921a-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/eade0680c0c4/d4sc03921a-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/499b/11795837/692c34d5da20/d4sc03921a-f6.jpg

相似文献

1
A review of large language models and autonomous agents in chemistry.化学领域中大型语言模型与自主智能体的综述。
Chem Sci. 2024 Dec 9;16(6):2514-2572. doi: 10.1039/d4sc03921a. eCollection 2025 Feb 5.
2
Large language models and the future of rheumatology: assessing impact and emerging opportunities.大语言模型与风湿病学的未来:评估影响与新兴机遇。
Curr Opin Rheumatol. 2024 Jan 1;36(1):46-51. doi: 10.1097/BOR.0000000000000981. Epub 2023 Sep 18.
3
Use of SNOMED CT in Large Language Models: Scoping Review.SNOMED CT 在大语言模型中的应用:范围综述。
JMIR Med Inform. 2024 Oct 7;12:e62924. doi: 10.2196/62924.
4
SynAsk: unleashing the power of large language models in organic synthesis.SynAsk:释放大语言模型在有机合成中的力量。
Chem Sci. 2024 Nov 18;16(1):43-56. doi: 10.1039/d4sc04757e. eCollection 2024 Dec 18.
5
Large Language Model Applications for Health Information Extraction in Oncology: Scoping Review.用于肿瘤学健康信息提取的大语言模型应用:范围综述
JMIR Cancer. 2025 Mar 28;11:e65984. doi: 10.2196/65984.
6
Augmenting large language models with chemistry tools.用化学工具增强大语言模型。
Nat Mach Intell. 2024;6(5):525-535. doi: 10.1038/s42256-024-00832-8. Epub 2024 May 8.
7
Leveraging Large Language Models for Precision Monitoring of Chemotherapy-Induced Toxicities: A Pilot Study with Expert Comparisons and Future Directions.利用大语言模型进行化疗诱导毒性的精准监测:一项专家比较及未来方向的试点研究
Cancers (Basel). 2024 Aug 12;16(16):2830. doi: 10.3390/cancers16162830.
8
Large Language Models and User Trust: Consequence of Self-Referential Learning Loop and the Deskilling of Health Care Professionals.大语言模型与用户信任:自我参照学习循环的后果及医疗保健专业人员的技能退化
J Med Internet Res. 2024 Apr 25;26:e56764. doi: 10.2196/56764.
9
Evaluating the effectiveness of large language models in abstract screening: a comparative analysis.评估大型语言模型在摘要筛选中的有效性:一项对比分析。
Syst Rev. 2024 Aug 21;13(1):219. doi: 10.1186/s13643-024-02609-x.
10
ProtAgents: protein discovery large language model multi-agent collaborations combining physics and machine learning.ProtAgents:蛋白质发现大型语言模型,结合物理和机器学习的多智能体协作。
Digit Discov. 2024 May 17;3(7):1389-1409. doi: 10.1039/d4dd00013g. eCollection 2024 Jul 10.

引用本文的文献

1
BioBricks.ai: a versioned data registry for life sciences data assets.BioBricks.ai:生命科学数据资产的版本化数据注册库。
Front Artif Intell. 2025 Aug 13;8:1599412. doi: 10.3389/frai.2025.1599412. eCollection 2025.
2
Fine-Tuned Large Language Models for High-Accuracy Prediction of Band Gap and Stability in Transition Metal Sulfides.用于高精度预测过渡金属硫化物带隙和稳定性的微调大语言模型
Materials (Basel). 2025 Aug 13;18(16):3793. doi: 10.3390/ma18163793.
3
AI and automation: democratizing automation and the evolution towards true AI-autonomous robotics.

本文引用的文献

1
Human interpretable structure-property relationships in chemistry using explainable machine learning and large language models.利用可解释机器学习和大语言模型建立化学中人类可解释的结构-性质关系。
Commun Chem. 2025 Jan 14;8(1):11. doi: 10.1038/s42004-024-01393-y.
2
From text to insight: large language models for chemical data extraction.从文本到洞察:用于化学数据提取的大语言模型
Chem Soc Rev. 2025 Feb 3;54(3):1125-1150. doi: 10.1039/d4cs00913d.
3
CACTUS: Chemistry Agent Connecting Tool Usage to Science.仙人掌:将化学试剂连接工具的使用与科学相结合。
人工智能与自动化:使自动化民主化以及向真正的人工智能自主机器人技术的演进。
Chem Sci. 2025 Aug 4. doi: 10.1039/d5sc03183d.
4
Assay2Mol: large language model-based drug design using BioAssay context.分析到分子:基于大语言模型并利用生物分析背景的药物设计
ArXiv. 2025 Jul 16:arXiv:2507.12574v1.
5
Implementation of an open chemistry knowledge base with a Semantic Wiki.使用语义维基实现一个开放化学知识库。
J Cheminform. 2025 Jul 6;17(1):99. doi: 10.1186/s13321-025-01037-w.
6
Chemical Language Model Linker: blending text and molecules with modular adapters.化学语言模型链接器:通过模块化适配器融合文本与分子。
ArXiv. 2025 Jun 13:arXiv:2410.20182v3.
7
A Perspective on Foundation Models in Chemistry.化学领域基础模型的视角
JACS Au. 2025 Mar 25;5(4):1499-1518. doi: 10.1021/jacsau.4c01160. eCollection 2025 Apr 28.
8
Leveraging Prompt Engineering in Large Language Models for Accelerating Chemical Research.利用大语言模型中的提示工程加速化学研究。
ACS Cent Sci. 2025 Apr 2;11(4):511-519. doi: 10.1021/acscentsci.4c01935. eCollection 2025 Apr 23.
9
Unified Deep Learning of Molecular and Protein Language Representations with T5ProtChem.利用T5ProtChem对分子和蛋白质语言表征进行统一深度学习。
J Chem Inf Model. 2025 Apr 28;65(8):3990-3998. doi: 10.1021/acs.jcim.5c00051. Epub 2025 Apr 8.
10
Molecular analysis and design using generative artificial intelligence multi-agent modeling.使用生成式人工智能多智能体建模的分子分析与设计
Mol Syst Des Eng. 2025 Jan 24;10(4):314-337. doi: 10.1039/d4me00174e. eCollection 2025 Mar 31.
ACS Omega. 2024 Oct 25;9(46):46563-46573. doi: 10.1021/acsomega.4c08408. eCollection 2024 Nov 19.
4
An automatic end-to-end chemical synthesis development platform powered by large language models.基于大型语言模型的自动化端到端化学合成开发平台。
Nat Commun. 2024 Nov 23;15(1):10160. doi: 10.1038/s41467-024-54457-x.
5
Empowering biomedical discovery with AI agents.利用人工智能代理增强生物医学发现。
Cell. 2024 Oct 31;187(22):6125-6151. doi: 10.1016/j.cell.2024.09.022.
6
How Does a Generative Large Language Model Perform on Domain-Specific Information Extraction?─A Comparison between GPT-4 and a Rule-Based Method on Band Gap Extraction.生成式大型语言模型在特定领域的信息抽取方面表现如何?─基于规则的方法与 GPT-4 在能带隙提取方面的比较。
J Chem Inf Model. 2024 Oct 28;64(20):7895-7904. doi: 10.1021/acs.jcim.4c00882. Epub 2024 Oct 7.
7
Pushing the Boundaries of Molecular Property Prediction for Drug Discovery with Multitask Learning BERT Enhanced by SMILES Enumeration.通过SMILES枚举增强的多任务学习BERT推动药物发现中分子性质预测的边界
Research (Wash D C). 2022 Dec 15;2022:0004. doi: 10.34133/research.0004. eCollection 2022.
8
Large Language Models as Molecular Design Engines.大语言模型作为分子设计引擎。
J Chem Inf Model. 2024 Sep 23;64(18):7086-7096. doi: 10.1021/acs.jcim.4c01396. Epub 2024 Sep 4.
9
Extracting structured data from organic synthesis procedures using a fine-tuned large language model.使用微调的大语言模型从有机合成程序中提取结构化数据。
Digit Discov. 2024 Jul 31;3(9):1822-1831. doi: 10.1039/d4dd00091a. eCollection 2024 Sep 11.
10
Transformers for Molecular Property Prediction: Lessons Learned from the Past Five Years.分子性质预测中的变压器:过去五年的经验教训。
J Chem Inf Model. 2024 Aug 26;64(16):6259-6280. doi: 10.1021/acs.jcim.4c00747. Epub 2024 Aug 13.