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灰叶美冠兰(石蒜科)的种群遗传结构及保护意义

Population genetic structure of Phaedranassa cinerea Ravenna (Amaryllidaceae) and conservation implications.

作者信息

Buenaño María Belén, Ulloa Ulloa Carmen, Francisco-Ortega Javier, Meerow Alan W, Oleas Nora H

机构信息

Centro de Investigación del Territorio y Hábitat Sostenible (CITEHS), y Facultad de Ciencias de Medio Ambiente, Universidad Tecnológica Indoamérica, Machala y Sabanilla, Quito, Ecuador.

Missouri Botanical Garden, St. Louis, 4344 Shaw Blvd., MO, 63110, USA.

出版信息

BMC Plant Biol. 2025 Jan 24;25(1):106. doi: 10.1186/s12870-025-06073-0.

DOI:10.1186/s12870-025-06073-0
PMID:39856572
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11760094/
Abstract

BACKGROUND

Andean orography has shaped the endemism of plant species in montane forests, creating a mosaic of habitats in small and isolated areas. Understanding these endemic species' genetic diversity patterns is crucial for their conservation. Phaedranassa cinerea (Amaryllidaceae), a species restricted to the western Andes of Ecuador, is listed as "vulnerable" according to the IUCN criteria. This study seeks to determine whether there is genetic structure among and within Phaedranassa cinerea populations, estimate the timing of their genetic divergence, and recommend conservation strategies based on these genetic structure findings.

RESULTS

Using 13 microsatellites and a Bayesian approach, we analyzed the genetic differentiation of P. cinerea and possible diversification scenarios. Our results indicate that the genetic diversity of P. cinerea is lower than congeneric species. The Bayesian analysis identified two genetic groups, with no evidence of isolation by distance. Populations in the northwest of the Ecuadorean Andes have less allele richness compared to those in the southwest. Additionally, the species exhibits excess homozygosity and evidence of bottlenecks. Our Bayesian analysis suggests that the differentiation among populations was not older than 5,000 years and was as recent as 600 years ago for some of the populations. Based on the geographic distribution of the known populations, the species should be listed as endangered instead of vulnerable to extinction.

CONCLUSIONS

Phaedranassa cinerea shows lower genetic diversity than related species, with the most variation within populations. We identified two to four genetic groups, suggesting recent divergence along the ridges of the western Andes. The findings suggest that conservation efforts should focus on securing genetic exchange between populations to preserve the genetic diversity of P. cinerea.

摘要

背景

安第斯山脉的地形塑造了山地森林中植物物种的特有性,在狭小且孤立的区域形成了多样化的栖息地。了解这些特有物种的遗传多样性模式对于它们的保护至关重要。灰叶花烛(石蒜科)是一种仅限于厄瓜多尔西部安第斯山脉的物种,根据国际自然保护联盟的标准被列为“易危”物种。本研究旨在确定灰叶花烛种群之间以及种群内部是否存在遗传结构,估计其遗传分化的时间,并根据这些遗传结构的发现推荐保护策略。

结果

我们使用13个微卫星和贝叶斯方法分析了灰叶花烛的遗传分化以及可能的多样化情况。我们的结果表明,灰叶花烛的遗传多样性低于同属物种。贝叶斯分析确定了两个遗传组,没有距离隔离的证据。与厄瓜多尔安第斯山脉西南部的种群相比,西北部的种群等位基因丰富度较低。此外,该物种表现出纯合度过高和瓶颈效应的证据。我们的贝叶斯分析表明,种群间的分化不超过5000年,对于一些种群来说,最近的分化发生在600年前。根据已知种群的地理分布,该物种应被列为濒危物种而非易危物种。

结论

灰叶花烛的遗传多样性低于相关物种,种群内部的变异最大。我们确定了两到四个遗传组,表明最近沿着安第斯山脉西部山脊发生了分化。研究结果表明,保护工作应侧重于确保种群之间的基因交流,以保护灰叶花烛的遗传多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c1a/11760094/7e213bbcb236/12870_2025_6073_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c1a/11760094/b26831999bb8/12870_2025_6073_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c1a/11760094/2eef7d608946/12870_2025_6073_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c1a/11760094/951e781e805c/12870_2025_6073_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c1a/11760094/7e213bbcb236/12870_2025_6073_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c1a/11760094/b26831999bb8/12870_2025_6073_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c1a/11760094/2eef7d608946/12870_2025_6073_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c1a/11760094/951e781e805c/12870_2025_6073_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c1a/11760094/7e213bbcb236/12870_2025_6073_Fig4_HTML.jpg

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