Han Huan, Su Hanwen, Lv Zhihua, Zhu Chengliang, Huang Jingtao
Department of Clinical Laboratory, Institute of Translational Medicine, Renmin Hospital of Wuhan University, Wuhan 430060, Hubei, China.
Biomedicines. 2025 Jan 13;13(1):185. doi: 10.3390/biomedicines13010185.
Prostate cancer remains one of the leading causes of cancer-related mortality in men worldwide. The treatment of it is currently based on surgical removal, radiotherapy, and hormone therapy. It is crucial to improve therapeutic prospects for the diagnosis and treatment of prostate cancer via drug target screening. We integrated eQTL data from the eQTLGen Consortium and pQTL data from UK Biobank Proteome Plasma Proteins (UKB-PPP) and deCODE health datasets. MR analyses (SMR, heterogeneity in dependent instruments (HEIDI), IVW, Wald ratio, weighted median, and MR-Egger) were used to screen candidate genes associated with prostate adenocarcinoma (PRAD) risk. Candidate genes were further verified through TCGA-based gene expression profile, survival analysis, and immune microenvironment evaluations. TIDE analysis was utilized to investigate gene immunotherapy response. Single-cell RNA sequencing data from the GSE176031 dataset were used to investigate the gene expression patterns. The Drug Bank, Therapeutic Target Database and Drug Signatures Database were utilized to predict targeted drugs for candidate genes. MTHFD1 and LGALS4 were identified as promising therapeutic targets for PRAD, with evidence provided at multi-omics levels. LGALS4 was predominantly expressed in malignant cells and was correlated with enhanced immune checkpoint pathways, increased TIDE scores, and immunotherapy resistance. In contrast, MTHFD1was expressed in both tumor and microenvironmental cells and was associated with poor survival. Drug target prediction suggested that there are no currently approved drugs specifically targeting MTHFD1 and LGALS4. Our study identified MTHFD1 and LGALS4 as potential preventive targets for PRAD. However, future experiments are warranted to assess the utility and effectiveness of these candidate proteins.
前列腺癌仍然是全球男性癌症相关死亡的主要原因之一。目前其治疗方法基于手术切除、放疗和激素疗法。通过药物靶点筛选来改善前列腺癌的诊断和治疗前景至关重要。我们整合了来自eQTLGen联盟的eQTL数据以及来自英国生物银行蛋白质组血浆蛋白(UKB-PPP)和deCODE健康数据集的pQTL数据。采用孟德尔随机化分析(SMR、依赖工具异质性(HEIDI)、逆方差加权法(IVW)、Wald比、加权中位数和MR-Egger)来筛选与前列腺腺癌(PRAD)风险相关的候选基因。通过基于TCGA的基因表达谱、生存分析和免疫微环境评估对候选基因进行进一步验证。利用TIDE分析来研究基因免疫治疗反应。使用来自GSE176031数据集的单细胞RNA测序数据来研究基因表达模式。利用药物银行、治疗靶点数据库和药物特征数据库来预测候选基因的靶向药物。已确定甲基四氢叶酸脱氢酶1(MTHFD1)和半乳糖凝集素4(LGALS4)是PRAD有前景的治疗靶点,并在多组学水平提供了证据。LGALS4主要在恶性细胞中表达,与免疫检查点通路增强、TIDE评分增加和免疫治疗耐药性相关。相比之下,MTHFD1在肿瘤细胞和微环境细胞中均有表达,且与不良生存相关。药物靶点预测表明,目前没有专门针对MTHFD1和LGALS4的获批药物。我们的研究确定MTHFD1和LGALS4是PRAD的潜在预防靶点。然而,未来有必要进行实验来评估这些候选蛋白的效用和有效性。