Hong Jin Young, Jeon Wan-Jin, Kim Hyunseong, Yeo Changhwan, Kim Hyun, Lee Yoon Jae, Ha In-Hyuk
Jaseng Spine and Joint Research Institute, Jaseng Medical Foundation, Seoul 135-896, Republic of Korea.
Biomedicines. 2025 Jan 14;13(1):192. doi: 10.3390/biomedicines13010192.
BACKGROUND/OBJECTIVES: Lumbar spinal stenosis (LSS) is a degenerative condition characterized by the narrowing of the spinal canal, resulting in chronic pain and impaired mobility. However, the molecular mechanisms underlying LSS remain unclear. In this study, we performed RNA sequencing (RNA-seq) to investigate differential gene expression in a rat LSS model and identify the key genes and pathways involved in its pathogenesis.
We used bioinformatics analysis to identify significant alterations in gene expression between the LSS-induced and sham groups.
Pearson's correlation analysis demonstrated strongly consistent intragroup expression (r > 0.9), with distinct gene expression between the LSS and sham groups. A total of 113 differentially expressed genes (DEGs) were identified, including upregulated genes such as and and downregulated genes such as and . Functional enrichment analysis revealed that these DEGs included those involved in key biological processes, including synaptic plasticity, extracellular matrix organization, and hormonal regulation. Gene ontology analysis highlighted critical molecular functions such as mRNA binding and integrin binding, as well as cellular components such as contractile fibers and the extracellular matrix, which were significantly affected by LSS.
Our findings provide novel insights into the molecular mechanisms underlying LSS and offer potential avenues for the development of targeted therapies aimed at mitigating disease progression and improving patient outcomes.
背景/目的:腰椎管狭窄症(LSS)是一种以椎管狭窄为特征的退行性疾病,可导致慢性疼痛和活动能力受损。然而,LSS的分子机制仍不清楚。在本研究中,我们进行了RNA测序(RNA-seq),以研究大鼠LSS模型中的差异基因表达,并确定其发病机制中涉及的关键基因和途径。
我们使用生物信息学分析来确定LSS诱导组和假手术组之间基因表达的显著变化。
Pearson相关性分析表明组内表达高度一致(r > 0.9),LSS组和假手术组之间基因表达明显不同。共鉴定出113个差异表达基因(DEG),包括上调基因如 和 以及下调基因如 和 。功能富集分析显示,这些DEG包括参与关键生物学过程的基因,如突触可塑性、细胞外基质组织和激素调节。基因本体分析突出了关键的分子功能,如mRNA结合和整合素结合,以及细胞成分,如收缩纤维和细胞外基质,它们受到LSS的显著影响。
我们的研究结果为LSS的分子机制提供了新的见解,并为开发旨在减缓疾病进展和改善患者预后的靶向治疗提供了潜在途径。