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肝细胞癌中乳酸化与线粒体相关基因的多组学分析确定MRPL3为一种新的预后生物标志物。

Multiomic analysis of lactylation and mitochondria-related genes in hepatocellular carcinoma identified MRPL3 as a new prognostic biomarker.

作者信息

Xing Wenya, Zhou Yuanzi, Long Qiuzi, Yi Nan, Wang Gaoyuan, Shi Rongwei, Huang Jinlong, Yin Xindong, Zhu Taiyang, Cao Shibing

机构信息

Department of General Surgery, Affiliated Hospital of Nanjing University of Chinese Medicine, Jiangsu Province Hospital of Chinese Medicine, Nanjing, China.

Nanjing University of Chinese Medicine, Nanjing, China.

出版信息

Front Oncol. 2025 Jan 10;14:1511958. doi: 10.3389/fonc.2024.1511958. eCollection 2024.

Abstract

BACKGROUND

Recent research has highlighted lactate's crucial role in epigenetic regulation, particularly by influencing histone modifications that drive the initiation and progression of hepatocellular carcinoma (HCC). While mitochondria are known to regulate tumor behavior, the interaction between lactate metabolism and mitochondrial function in cancer tissues remains underexplored. Understanding this relationship may provide deeper insights into tumor metabolic reprogramming and reveal novel therapeutic targets for HCC and other malignancies.

METHODS

We conducted a comprehensive screening of lactylation- and mitochondria-associated genes (LMRGs) in HCC patients, followed by clustering based on these genes. Prognostic outcomes and pathway enrichment were analyzed across the identified clusters. Additionally, we developed a prognostic model based on LMRGs, examining its implications for survival, immune response, and drug sensitivity. experiments were performed to validate the expression patterns and functional role of MRPL3 in HCC.

RESULTS

We developed a prognostic model, named the LMRG model, incorporating three key genes: ACACA, MRPL3, and MRPS23. This model revealed significant differences in survival outcomes, immune responses, and drug sensitivity between patients with high and low LMRG scores. MRPL3 was found to be overexpressed in HCC, playing a critical role in tumor growth and metastasis. These results were further validated through experiments, confirming MRPL3's role in HCC cell proliferation and invasion.

CONCLUSION

We created a predictive model, LMRG, and identified MRPL3 as a key biomarker. Our findings suggest that MRPL3 has significant potential as a reliable predictive biomarker for clinical applications in HCC diagnosis and treatment.

摘要

背景

最近的研究突出了乳酸在表观遗传调控中的关键作用,特别是通过影响驱动肝细胞癌(HCC)起始和进展的组蛋白修饰。虽然已知线粒体可调节肿瘤行为,但癌症组织中乳酸代谢与线粒体功能之间的相互作用仍未得到充分探索。了解这种关系可能会为肿瘤代谢重编程提供更深入的见解,并揭示HCC和其他恶性肿瘤的新治疗靶点。

方法

我们对HCC患者的乳酸化和线粒体相关基因(LMRGs)进行了全面筛选,然后基于这些基因进行聚类。分析了所识别聚类的预后结果和通路富集情况。此外,我们基于LMRGs开发了一种预后模型,研究其对生存、免疫反应和药物敏感性的影响。进行实验以验证MRPL3在HCC中的表达模式和功能作用。

结果

我们开发了一种名为LMRG模型的预后模型,纳入了三个关键基因:ACACA、MRPL3和MRPS23。该模型揭示了高LMRG评分和低LMRG评分患者在生存结果、免疫反应和药物敏感性方面的显著差异。发现MRPL3在HCC中过表达,在肿瘤生长和转移中起关键作用。这些结果通过实验进一步得到验证,证实了MRPL3在HCC细胞增殖和侵袭中的作用。

结论

我们创建了一个预测模型LMRG,并将MRPL3鉴定为关键生物标志物。我们的研究结果表明,MRPL3作为HCC诊断和治疗临床应用中可靠的预测生物标志物具有巨大潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7a40/11757296/0db95078fc2d/fonc-14-1511958-g001.jpg

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