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儿童肾病综合征中的微小RNA表达及靶标预测

MicroRNA Expression and Target Prediction in Children with Nephrotic Syndrome.

作者信息

Charmine Pricilla, Venkatesan Vettriselvi, Geminiganesan Sangeetha, Nammalwar Bollam Rangaswamy, Dandapani Mohanapriya Chinambedu

机构信息

Faculty of Clinical Research, Sri Ramachandra Institute of Higher Education and Research (SRIHER), Porur, Chennai, India.

Department of Human Genetics, Sri Ramachandra Institute of Higher Education and Research (SRIHER), Porur, Chennai, India.

出版信息

Indian J Nephrol. 2025 Jan-Feb;35(1):59-63. doi: 10.25259/ijn_47_23. Epub 2024 Jun 17.

DOI:10.25259/ijn_47_23
PMID:39872258
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11763170/
Abstract

BACKGROUND

Nephrotic syndrome is a common cause of kidney diseases in children. Many studies have examined the association of microRNAs playing potential roles in many pathophysiological functions. We investigated the expression pattern of the microRNAs miR-17-5P, miR-155p, miR-424-5p in children with steroid sensitive nephrotic syndrome (SSNS) and steroid resistance nephrotic syndrome (SRNS), along with the healthy subjects.

MATERIALS AND METHODS

Total RNA was isolated from the urine samples from the three groups (SSNS n = 100, SRNS n = 100, and healthy control group n = 100). Bioinformatics tools such as miRWalk and miR-Tar link were used in predicting targets for the microRNAs. Online database and g profiler software are used to evaluate the targets based on the biological functions. The expression pattern for the candidate microRNAs was carried out using quantitative real time polymerase chain reaction (RT-PCR) equipment.

RESULTS

miR-424 and miR-155 were upregulated in SRNS group while miR-17 was downregulated in SRNS group. miR-424-5p and miR-155p was up regulated in SRNS group while miR-17-5p was downregulated.

CONCLUSION

Combined analysis of gene expression along with studied candidate microRNAs can give better understanding of the pathogenesis of childhood nephrotic syndrome.

摘要

背景

肾病综合征是儿童肾脏疾病的常见病因。许多研究探讨了在多种病理生理功能中发挥潜在作用的微小RNA之间的关联。我们研究了微小RNA miR-17-5P、miR-155p、miR-424-5p在激素敏感型肾病综合征(SSNS)和激素抵抗型肾病综合征(SRNS)患儿以及健康受试者中的表达模式。

材料与方法

从三组(SSNS组n = 100、SRNS组n = 100和健康对照组n = 100)的尿液样本中分离总RNA。使用miRWalk和miR-Tar link等生物信息学工具预测微小RNA的靶标。利用在线数据库和g profiler软件基于生物学功能评估靶标。使用定量实时聚合酶链反应(RT-PCR)设备检测候选微小RNA的表达模式。

结果

SRNS组中miR-424和miR-155上调,而miR-17下调。SRNS组中miR-424-5p和miR-155p上调,而miR-17-5p下调。

结论

对基因表达以及所研究的候选微小RNA进行联合分析,有助于更好地理解儿童肾病综合征的发病机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/284e/11763170/1eab75f650e4/IJN-35-1-59-g3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/284e/11763170/1150dee0a239/IJN-35-1-59-g1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/284e/11763170/901aa052c7de/IJN-35-1-59-g2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/284e/11763170/1eab75f650e4/IJN-35-1-59-g3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/284e/11763170/1150dee0a239/IJN-35-1-59-g1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/284e/11763170/901aa052c7de/IJN-35-1-59-g2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/284e/11763170/1eab75f650e4/IJN-35-1-59-g3.jpg

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本文引用的文献

1
MicroRNAs as Biomarkers for Nephrotic Syndrome.微小 RNA 作为肾病综合征的生物标志物。
Int J Mol Sci. 2020 Dec 23;22(1):88. doi: 10.3390/ijms22010088.
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[Role of microRNA-17-5p in the pathogenesis of pediatric nephrotic syndrome and related mechanisms].[微小RNA-17-5p在小儿肾病综合征发病机制中的作用及相关机制]
Zhongguo Dang Dai Er Ke Za Zhi. 2020 Sep;22(9):958-963. doi: 10.7499/j.issn.1008-8830.2003329.
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miR-155-5p Implicates in the Pathogenesis of Renal Fibrosis via Targeting SOCS1 and SOCS6.miR-155-5p 通过靶向 SOCS1 和 SOCS6 参与肾纤维化的发病机制。
Oxid Med Cell Longev. 2020 Jun 6;2020:6263921. doi: 10.1155/2020/6263921. eCollection 2020.
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Upregulation of microRNA-424 relieved diabetic nephropathy by targeting Rictor through mTOR Complex2/Protein Kinase B signaling.miR-424 的上调通过靶向 mTORC2/蛋白激酶 B 信号通路抑制 Rictor 缓解糖尿病肾病。
J Cell Physiol. 2019 Jul;234(7):11646-11653. doi: 10.1002/jcp.27822. Epub 2019 Jan 13.
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miRWalk: An online resource for prediction of microRNA binding sites.miRWalk:一个用于预测 microRNA 结合位点的在线资源。
PLoS One. 2018 Oct 18;13(10):e0206239. doi: 10.1371/journal.pone.0206239. eCollection 2018.
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Management of Nephrotic Syndrome in the Pregnant Patient.孕期肾病综合征的管理
J Reprod Med. 2016 Nov-Dec;61(11-12):557-61.
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An update on LDL apheresis for nephrotic syndrome.肾病综合征 LDL 吸附疗法的最新进展。
Pediatr Nephrol. 2019 Oct;34(10):1655-1669. doi: 10.1007/s00467-018-4061-9. Epub 2018 Sep 14.
8
Idiopathic Nephrotic Syndrome: Characteristics and Identification of Prognostic Factors.特发性肾病综合征:特征及预后因素的识别
J Clin Med. 2018 Sep 9;7(9):265. doi: 10.3390/jcm7090265.
9
Role of MicroRNAs in Renal Parenchymal Diseases-A New Dimension.微小 RNA 在肾实质疾病中的作用——新视角。
Int J Mol Sci. 2018 Jun 17;19(6):1797. doi: 10.3390/ijms19061797.
10
Protecting Podocytes: A Key Target for Therapy of Focal Segmental Glomerulosclerosis.保护足细胞:局灶节段性肾小球硬化症治疗的关键靶点。
Am J Nephrol. 2018;47 Suppl 1(Suppl 1):14-29. doi: 10.1159/000481634. Epub 2018 May 31.