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血流感染中分离株群体的遗传多样性和毒力

Genetic diversity and virulence of group isolates from bloodstream infections.

作者信息

Okutani Akiko, Okugawa Shu, Fujimoto Fumie, Ikeda Mahoko, Tsutsumi Takeya, Moriya Kyoji, Maeda Ken

机构信息

Department of Veterinary Science, National Institute of Infectious Diseases, Tokyo, Japan.

Department of Infectious Diseases, The University of Tokyo Hospital, Tokyo, Japan.

出版信息

Microbiol Spectr. 2025 Mar 4;13(3):e0240724. doi: 10.1128/spectrum.02407-24. Epub 2025 Jan 28.

Abstract

catheter-related bloodstream infections (CRBSIs) are an increasing concern in Japanese hospitals. Although their clinical characteristics have been explored, the genetic relationships and virulence profiles of isolates from CRBSIs remain understudied. Here, using advanced genomic techniques, we investigated the genetic diversity, phylogenetic relationships, and virulence profiles of isolates from patients with bloodstream infections. We analyzed 28 group strains isolated from blood samples at the University of Tokyo Hospital between 2005 and 2017 using whole-genome sequencing, core-genome single-nucleotide polymorphism (SNP) typing, and virulence gene profiling. Core-genome SNP analysis revealed significant genetic diversity among the isolates, suggesting multiple independent sources of infection. The isolates predominantly belonged to clades III and IV, with distinct virulence gene profiles. All clade III isolates contained operon genes, whereas four isolates from clade IV harbored cereulide synthetase genes (). One isolate possessed a capsule gene operon (), a rare finding among clinical strains. Biofilm formation ability was observed in 50% of catheter-related isolates, although this ability was not significantly different from that of the noncatheter-related isolates.IMPORTANCEThis study provides novel insights into the genetic diversity and virulence potential of strains causing bloodstream infections in a Japanese hospital setting. These findings suggest diverse infection pathways and highlight the importance of continuous molecular epidemiological surveillance for effective infection control.

摘要

导管相关血流感染(CRBSIs)在日本医院中日益受到关注。尽管已经对其临床特征进行了探索,但来自CRBSIs的分离株的遗传关系和毒力谱仍未得到充分研究。在此,我们使用先进的基因组技术,研究了血流感染患者分离株的遗传多样性、系统发育关系和毒力谱。我们对2005年至2017年间从东京大学医院血液样本中分离出的28株蜡样芽胞杆菌菌株进行了全基因组测序、核心基因组单核苷酸多态性(SNP)分型和毒力基因分析。核心基因组SNP分析显示分离株之间存在显著的遗传多样性,提示存在多个独立的感染源。分离株主要属于进化枝III和IV,具有不同的毒力基因谱。所有进化枝III分离株都含有呕吐毒素操纵子基因,而进化枝IV的4株分离株含有cereulide合成酶基因(ces)。一株分离株拥有一个荚膜基因操纵子(cap),这在临床蜡样芽胞杆菌菌株中是一个罕见的发现。在50%的导管相关分离株中观察到生物膜形成能力,尽管这种能力与非导管相关分离株没有显著差异。重要性本研究为日本医院环境中引起血流感染的蜡样芽胞杆菌菌株的遗传多样性和毒力潜力提供了新的见解。这些发现提示了不同的感染途径,并强调了持续进行分子流行病学监测以有效控制感染的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c27/11878096/6e06a6863419/spectrum.02407-24.f001.jpg

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