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一名携带新发PAK2变异个体中2型诺布洛克综合征的表型扩展

Phenotypic Expansion of Knobloch Syndrome Type 2 in an Individual With a De Novo PAK2 Variant.

作者信息

Werren Elizabeth A, Kalsner Louisa, Ewald Jessica M, Peracchio Michael, King Cameron, Vats Purva, Audano Peter A, Robinson Peter N, Adams Mark D, Kelly Melissa A, Matson Adam P

机构信息

The Jackson Laboratory for Genomic Medicine, Farmington, Connecticut, USA.

Department of Pediatrics, University of Connecticut School of Medicine, Farmington, Connecticut, USA.

出版信息

Am J Med Genet A. 2025 Jun;197(6):e64006. doi: 10.1002/ajmg.a.64006. Epub 2025 Jan 28.

DOI:10.1002/ajmg.a.64006
PMID:39876536
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12052494/
Abstract

P21-activated kinase 2 (PAK2) is a serine/threonine kinase essential for a variety of cellular processes including signal transduction, cellular survival, proliferation, and migration. A recent report proposed monoallelic PAK2 variants cause Knobloch syndrome type 2 (KNO2)-a developmental disorder primarily characterized by ocular anomalies. Here, we identified a novel de novo heterozygous missense variant in PAK2, NM_002577.4:c.1273G>A, p.(D425N), by genome sequencing in an individual with features consistent with KNO2. Notable clinical phenotypes observed in this individual were global developmental delay, congenital retinal detachment, mild cerebral ventriculomegaly, hypotonia, failure to thrive, pyloric stenosis, feeding intolerance, patent ductus arteriosus, and mild facial dysmorphism. The p.(D425N) variant lies within the protein kinase domain and is predicted to be functionally damaging by in silico analysis. Previous clinical genetic testing did not report this variant due to unknown relevance of PAK2 variants at the time of testing, highlighting the importance of reanalysis. Our findings substantiate the candidacy of PAK2 variants in KNO2 and expand the KNO2 clinical phenotypic spectrum.

摘要

p21激活激酶2(PAK2)是一种丝氨酸/苏氨酸激酶,对包括信号转导、细胞存活、增殖和迁移在内的多种细胞过程至关重要。最近的一份报告提出,单等位基因PAK2变异会导致2型诺布罗赫综合征(KNO2)——一种主要以眼部异常为特征的发育障碍。在此,我们通过基因组测序在一名具有与KNO2相符特征的个体中鉴定出PAK2基因的一种新的从头杂合错义变异,即NM_002577.4:c.1273G>A,p.(D425N)。在该个体中观察到的显著临床表型包括全面发育迟缓、先天性视网膜脱离、轻度脑室扩大、肌张力减退、生长发育不良、幽门狭窄、喂养不耐受、动脉导管未闭和轻度面部畸形。p.(D425N)变异位于蛋白激酶结构域内,经计算机分析预测具有功能损害性。由于检测时PAK2变异的相关性未知,之前的临床基因检测未报告此变异,这凸显了重新分析的重要性。我们的研究结果证实了PAK2变异在KNO2中的候选地位,并扩展了KNO2的临床表型谱。

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引用本文的文献

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Mol Genet Genomic Med. 2025 Apr;13(4):e70099. doi: 10.1002/mgg3.70099.

本文引用的文献

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New kinase-deficient PAK2 variants associated with Knobloch syndrome type 2.与 2 型诺布洛克综合征相关的新型激酶缺陷性 PAK2 变异体。
Clin Genet. 2024 Oct;106(4):518-524. doi: 10.1111/cge.14578. Epub 2024 Jun 18.
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Detection of mosaic and population-level structural variants with Sniffles2.使用 Sniffles2 检测嵌合体和群体水平的结构变异。
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Read-Based Phasing and Analysis of Phased Variants with WhatsHap.基于读段的相位分析和 WhatsHap 分析相变异构体。
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Hum Mol Genet. 2021 Dec 17;31(1):1-9. doi: 10.1093/hmg/ddab026.
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PAK3 mutations responsible for severe intellectual disability and callosal agenesis inhibit cell migration.导致严重智力残疾和胼胝体发育不全的PAK3突变会抑制细胞迁移。
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