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关于发现天然抗菌肽的筛选方法的综述

A review on the screening methods for the discovery of natural antimicrobial peptides.

作者信息

Yang Bin, Yang Hongyan, Liang Jianlong, Chen Jiarou, Wang Chunhua, Wang Yuanyuan, Wang Jincai, Luo Wenhui, Deng Tao, Guo Jialiang

机构信息

School of Medicine, Foshan University, Foshan, Guangdong, 528000, China.

College of Pharmacy, Jinan University, Guangzhou, 510632, China.

出版信息

J Pharm Anal. 2025 Jan;15(1):101046. doi: 10.1016/j.jpha.2024.101046. Epub 2024 Jul 18.

DOI:10.1016/j.jpha.2024.101046
PMID:39885972
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11780100/
Abstract

Natural antimicrobial peptides (AMPs) are promising candidates for the development of a new generation of antimicrobials to combat antibiotic-resistant pathogens. They have found extensive applications in the fields of medicine, food, and agriculture. However, efficiently screening AMPs from natural sources poses several challenges, including low efficiency and high antibiotic resistance. This review focuses on the action mechanisms of AMPs, both through membrane and non-membrane routes. We thoroughly examine various highly efficient AMP screening methods, including whole-bacterial adsorption binding, cell membrane chromatography (CMC), phospholipid membrane chromatography binding, membrane-mediated capillary electrophoresis (CE), colorimetric assays, thin layer chromatography (TLC), fluorescence-based screening, genetic sequencing-based analysis, computational mining of AMP databases, and virtual screening methods. Additionally, we discuss potential developmental applications for enhancing the efficiency of AMP discovery. This review provides a comprehensive framework for identifying AMPs within complex natural product systems.

摘要

天然抗菌肽(AMPs)是开发新一代抗菌药物以对抗抗生素耐药病原体的有前途的候选物。它们已在医学、食品和农业领域得到广泛应用。然而,从天然来源高效筛选抗菌肽面临若干挑战,包括效率低下和高抗生素耐药性。本综述重点关注抗菌肽通过膜途径和非膜途径的作用机制。我们全面研究了各种高效的抗菌肽筛选方法,包括全细菌吸附结合、细胞膜色谱法(CMC)、磷脂膜色谱结合、膜介导毛细管电泳(CE)、比色测定法、薄层色谱法(TLC)、基于荧光的筛选、基于基因测序的分析、抗菌肽数据库的计算挖掘以及虚拟筛选方法。此外,我们还讨论了提高抗菌肽发现效率的潜在开发应用。本综述为在复杂天然产物系统中鉴定抗菌肽提供了一个全面的框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/26cd65e62ce6/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/68a532a0924b/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/f5274e61d90a/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/751e98e8e7a4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/c0fed4b2d60d/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/0262bce0dfaa/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/26cd65e62ce6/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/68a532a0924b/ga1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/f5274e61d90a/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/751e98e8e7a4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/c0fed4b2d60d/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/0262bce0dfaa/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4883/11780100/26cd65e62ce6/gr5.jpg

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Antibacterial activity of nonantibiotics is orthogonal to standard antibiotics.非抗生素的抗菌活性与标准抗生素正交。
Science. 2024 Apr 5;384(6691):93-100. doi: 10.1126/science.adk7368. Epub 2024 Mar 14.
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Study of the Antimicrobial Activity of the Human Peptide SQQ30 against Pathogenic Bacteria.人源肽SQQ30对病原菌抗菌活性的研究
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Drug Des Devel Ther. 2025 Mar 18;19:2051-2064. doi: 10.2147/DDDT.S501621. eCollection 2025.
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High-Precision Field- Effect Transistor Biosensor for Analyzing Differential Effects of Anti-Cancer Drugs on Cancerous and Non-Cancerous Cells.用于分析抗癌药物对癌细胞和非癌细胞的差异效应的高精度场效应晶体管生物传感器。
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Revisiting the potential of natural antimicrobial peptides against emerging respiratory viral disease: a review.重新审视天然抗菌肽对新发呼吸道病毒疾病的潜力:综述
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