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基于蛋白质组学的新型血浆检测方法用于普通人群多种癌症的早期检测。

Novel proteomics-based plasma test for early detection of multiple cancers in the general population.

作者信息

Budnik Bogdan, Amirkhani Hossein, Forouzanfar Mohammad H, Afshin Ashkan

机构信息

Novelna Inc, Palo Alto, California, USA.

出版信息

BMJ Oncol. 2024 Jan 9;3(1):e000073. doi: 10.1136/bmjonc-2023-000073. eCollection 2024.

Abstract

OBJECTIVE

Early detection of cancer is crucial for reducing the global burden of cancer, but effective screening tests for many cancers do not exist. This study aimed to develop a novel proteome-based multi-cancer screening test that can detect early-stage cancers with high accuracy.

METHODS AND ANALYSIS

We collected plasma samples from 440 individuals, healthy and diagnosed with 18 early-stage solid tumours. Using proximity extension assay, we measured more than 3000 high-abundance and low-abundance proteins in each sample. Then, using a multi-step statistical approach, we identified a limited set of sex-specific proteins that could detect early-stage cancers and their tissue of origin with high accuracy.

RESULTS

Our sex-specific cancer detection panels consisting of 10 proteins showed high accuracy for both males (area under the curve (AUC): 0.98, 95% CI 0.96, 1) and females (AUC: 0.983, 95% CI 0.95, 1.00). At stage I and at the specificity of 99%, our panels were able to identify 93% (95% CI 79%, 100%) of cancers among males and 84% (95% CI 68%, 100%) of cancers among females. Our sex-specific localisation panels consisted of 150 proteins and were able to identify the tissue of origin of most cancers in more than 80% of cases. The analysis of the plasma concentrations of proteins selected showed that almost all the proteins were in the low-concentration part of the human plasma proteome.

CONCLUSION

The proteome-based screening test showed promising performance compared with other technologies and could be a starting point for developing a new generation of screening tests for the early detection of cancer.

摘要

目的

癌症的早期检测对于减轻全球癌症负担至关重要,但许多癌症尚无有效的筛查测试。本研究旨在开发一种基于蛋白质组的新型多癌筛查测试,该测试能够高精度地检测早期癌症。

方法与分析

我们收集了440名个体的血浆样本,这些个体包括健康者以及被诊断患有18种早期实体瘤的患者。使用邻位延伸分析,我们测量了每个样本中3000多种高丰度和低丰度蛋白质。然后,使用多步统计方法,我们确定了一组有限的性别特异性蛋白质,这些蛋白质能够高精度地检测早期癌症及其起源组织。

结果

我们由10种蛋白质组成的性别特异性癌症检测面板对男性(曲线下面积(AUC):0.98,95%置信区间0.96,1)和女性(AUC:0.983,95%置信区间0.95,1.00)均显示出高精度。在I期且特异性为99%时,我们的检测面板能够识别男性中93%(95%置信区间79%,100%)的癌症以及女性中84%(95%置信区间68%,100%)的癌症。我们的性别特异性定位面板由150种蛋白质组成,能够在超过80%的病例中识别出大多数癌症的起源组织。对所选蛋白质血浆浓度的分析表明,几乎所有蛋白质都处于人类血浆蛋白质组的低浓度部分。

结论

与其他技术相比,基于蛋白质组的筛查测试表现出了良好的性能,可能成为开发新一代癌症早期检测筛查测试的起点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2a4/11235013/fea47d6dc662/bmjonc-2023-000073f01.jpg

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