Horikawa Akio, Okubo Rika, Hishikura Naoki, Watanabe Riki, Kurashima-Ito Kaori, Sayeesh Pooppadi Maxin, Inomata Kohsuke, Mishima Masaki, Koteishi Hiroyasu, Sawai Hitomi, Shiro Yoshitsugu, Ikeya Teppei, Ito Yutaka
Department of Chemistry, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Japan.
Laboratory for Dynamic Biomolecule Design, RIKEN Centre for Biosystems Dynamics Research, RIKEN, Yokohama, Japan.
Biomol NMR Assign. 2025 Jun;19(1):77-82. doi: 10.1007/s12104-025-10221-w. Epub 2025 Feb 1.
The symbiotic nitrogen-fixing bacterium Bradyrhizobium japonicum (B.japonicum) enables high soybean yields with little or no nitrogen fertiliser. A two component regulatory system comprising FixL, a histidine kinase with O-sensing activity, and FixJ, a response regulator, controls the expression of genes involved in nitrogen fixation, such as fixK and nifA. Only under anaerobic conditions, the monophosphate group is transferred from FixL to the N-terminal receiver domain of FixJ (FixJ), which eventually promote the association of the C-terminal effector domain (FixJ) to the promoter regions of the nitrogen-fixation-related genes. Structural biological analyses carried out so far for rhizobial FixJ molecules have proposed a solution structure for FixJ that differs from the crystal structures, in which the two domains are extended. To understand the FixJ activation caused by phosphorylation of the N-terminal domain, which presumably regulates through the interactions between FixJ and FixJ, here we have performed backbone and sidechain resonance assignments of the unphosphorylated state of B. japonicum FixJ.
共生固氮细菌日本慢生根瘤菌(B. japonicum)能够在很少或不施氮肥的情况下实现大豆高产。由具有氧气感应活性的组氨酸激酶FixL和应答调节因子FixJ组成的双组分调节系统,控制着参与固氮的基因(如fixK和nifA)的表达。只有在厌氧条件下,单磷酸基团才会从FixL转移到FixJ的N端接收结构域(FixJ),最终促进C端效应结构域(FixJ)与固氮相关基因的启动子区域结合。迄今为止对根瘤菌FixJ分子进行的结构生物学分析提出了一种与晶体结构不同的FixJ溶液结构,在晶体结构中两个结构域是伸展的。为了理解由N端结构域磷酸化引起的FixJ激活,推测其通过FixJ与FixJ之间的相互作用进行调节,我们在此对日本慢生根瘤菌FixJ的未磷酸化状态进行了主链和侧链共振归属。