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评估人细胞中外膜线粒体转位酶被前体蛋白堵塞情况的实验方案。

Protocol for assessing the clogging of the mitochondrial translocase of the outer membrane by precursor proteins in human cells.

作者信息

Kim John, Weidberg Hilla

机构信息

Life Sciences Institute, Department of Cellular and Physiological Sciences, University of British Columbia, Vancouver, BC V6T 1Z3, Canada.

出版信息

STAR Protoc. 2025 Mar 21;6(1):103617. doi: 10.1016/j.xpro.2025.103617. Epub 2025 Jan 31.

DOI:10.1016/j.xpro.2025.103617
PMID:39891917
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11835637/
Abstract

Protein import into the mitochondria is required for organellar function. Inefficient import can result in the stalling of mitochondrial precursors inside the translocase of the outer membrane (TOM) and blockage of the mitochondrial entry gate. Here, we present a protocol to assess the clogging of TOM by mitochondrial precursors in human cell lines. We describe how the localization of mitochondrial precursors can be determined by cellular fractionation. We then show how co-immunoprecipitation can be used to test the stalling of precursors inside TOM. For complete details on the use and execution of this protocol, please refer to Kim et al..

摘要

蛋白质导入线粒体是细胞器功能所必需的。导入效率低下会导致线粒体前体在外膜转位酶(TOM)内停滞,并阻塞线粒体的入口。在这里,我们提出了一种评估人类细胞系中线粒体前体对TOM阻塞情况的方案。我们描述了如何通过细胞分级分离来确定线粒体前体的定位。然后,我们展示了如何使用免疫共沉淀来检测前体在TOM内的停滞情况。有关该方案的使用和执行的完整详细信息,请参考Kim等人的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/c5d5889b495c/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/dc23d29c7354/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/5339b628bcf3/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/d395f2e5d616/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/2f75d4d1b1c2/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/c5d5889b495c/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/dc23d29c7354/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/5339b628bcf3/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/d395f2e5d616/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/2f75d4d1b1c2/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f45c/11835637/c5d5889b495c/gr4.jpg

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本文引用的文献

1
ATAD1 prevents clogging of TOM and damage caused by un-imported mitochondrial proteins.ATAD1 可防止 TOM 堵塞和未导入的线粒体蛋白造成的损伤。
Cell Rep. 2024 Aug 27;43(8):114473. doi: 10.1016/j.celrep.2024.114473. Epub 2024 Jul 17.
2
Mitochondrial DNA breaks activate an integrated stress response to reestablish homeostasis.线粒体 DNA 断裂会激活综合应激反应以重新建立体内平衡。
Mol Cell. 2023 Oct 19;83(20):3740-3753.e9. doi: 10.1016/j.molcel.2023.09.026. Epub 2023 Oct 12.
3
MTSviewer: A database to visualize mitochondrial targeting sequences, cleavage sites, and mutations on protein structures.
MTSviewer:一个用于可视化线粒体靶向序列、切割位点和蛋白质结构突变的数据库。
PLoS One. 2023 Apr 24;18(4):e0284541. doi: 10.1371/journal.pone.0284541. eCollection 2023.
4
Mitochondrial protein transport: Versatility of translocases and mechanisms.线粒体蛋白质转运:转位酶的多功能性及机制
Mol Cell. 2023 Mar 16;83(6):890-910. doi: 10.1016/j.molcel.2023.02.020.
5
OMA1-mediated integrated stress response protects against ferroptosis in mitochondrial cardiomyopathy.OMA1 介导的综合应激反应可防止线粒体心肌病中的铁死亡。
Cell Metab. 2022 Nov 1;34(11):1875-1891.e7. doi: 10.1016/j.cmet.2022.08.017. Epub 2022 Sep 15.
6
OMA1 mediates local and global stress responses against protein misfolding in CHCHD10 mitochondrial myopathy.OMA1 介导 CHCHD10 线粒体肌病中针对蛋白质错误折叠的局部和整体应激反应。
J Clin Invest. 2022 Jul 15;132(14). doi: 10.1172/JCI157504.
7
Global mitochondrial protein import proteomics reveal distinct regulation by translation and translocation machinery.全球线粒体蛋白导入蛋白质组学揭示了翻译和易位机制的不同调节。
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