Heidarian Yasaman, Fasteen Tess D, Mungcal Liam, Buddika Kasun, Mahmoudzadeh Nader H, Nemkov Travis, D'Alessandro Angelo, Tennessen Jason M
Department of Biology, Indiana University, Bloomington, IN 47405, USA.
Department of Biochemistry and Molecular Genetics, Anschutz Medical Campus, University of Colorado School of Medicine, Aurora, CO 80045, USA.
Mol Metab. 2025 Mar;93:102106. doi: 10.1016/j.molmet.2025.102106. Epub 2025 Jan 31.
The rapid growth that occurs during Drosophila larval development requires a dramatic rewiring of central carbon metabolism to support biosynthesis. Larvae achieve this metabolic state, in part, by coordinately up-regulating the expression of genes involved in carbohydrate metabolism. The resulting metabolic program exhibits hallmark characteristics of aerobic glycolysis and establishes a physiological state that supports growth. To date, the only factor known to activate the larval glycolytic program is the Drosophila Estrogen-Related Receptor (dERR). However, dERR is dynamically regulated during the onset of this metabolic switch, indicating that other factors must be involved. Here we examine the possibility that the Drosophila ortholog of Hypoxia inducible factor 1α (Hif1α) is also required to activate the larval glycolytic program.
CRISPR/Cas9 was used to generate new loss-of-function alleles in the Drosophila gene similar (sima), which encodes the sole fly ortholog of Hif1α. The resulting mutant strains were analyzed using a combination of metabolomics and RNAseq for defects in carbohydrate metabolism.
Our studies reveal that sima mutants fail to activate aerobic glycolysis and die during larval development with metabolic phenotypes that mimic those displayed by dERR mutants. Moreover, we demonstrate that dERR and Sima/Hif1α protein accumulation is mutually dependent, as loss of either transcription factor results in decreased abundance of the other protein.
These findings demonstrate that Sima/HIF1α is required during embryogenesis to coordinately up-regulate carbohydrate metabolism in preparation for larval growth. Notably, our study also reveals that the Sima/HIF1α-dependent gene expression program shares considerable overlap with that observed in dERR mutant, suggesting that Sima/HIF1α and dERR cooperatively regulate embryonic and larval glycolytic gene expression.
果蝇幼虫发育期间发生的快速生长需要对中心碳代谢进行重大重组以支持生物合成。幼虫部分通过协调上调参与碳水化合物代谢的基因表达来实现这种代谢状态。由此产生的代谢程序表现出有氧糖酵解的标志性特征,并建立了一种支持生长的生理状态。迄今为止,已知激活幼虫糖酵解程序的唯一因素是果蝇雌激素相关受体(dERR)。然而,dERR在这种代谢转换开始时受到动态调节,这表明必定涉及其他因素。在此,我们研究了果蝇缺氧诱导因子1α(Hif1α)的直系同源物是否也需要激活幼虫糖酵解程序。
利用CRISPR/Cas9在果蝇基因similar(sima)中产生新的功能丧失等位基因,该基因编码Hif1α的唯一果蝇直系同源物。使用代谢组学和RNA测序相结合的方法分析所得突变株的碳水化合物代谢缺陷。
我们的研究表明,sima突变体无法激活有氧糖酵解,并在幼虫发育期间死亡,其代谢表型与dERR突变体所显示的表型相似。此外,我们证明dERR和Sima/Hif1α蛋白积累相互依赖,因为任一转录因子的缺失都会导致另一种蛋白丰度降低。
这些发现表明,胚胎发育期间需要Sima/HIF1α来协调上调碳水化合物代谢,为幼虫生长做准备。值得注意的是,我们的研究还表明,Sima/HIF1α依赖性基因表达程序与在dERR突变体中观察到的程序有相当大的重叠,这表明Sima/HIF1α和dERR协同调节胚胎和幼虫糖酵解基因表达。