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使用CRISPR/Cas9对人类EYS基因座进行兆碱基缺失

Megabase Deletion of the Human EYS Locus Using CRISPR/Cas9.

作者信息

da Costa Bruna Lopes, Knudsen Anders Steen, Alves C Henrique, Tsang Stephen H, Quinn Peter M J

机构信息

Department of Biomedical Engineering, Columbia University, New York, NY, USA.

Jonas Children's Vision Care, and Bernard & Shirlee Brown Glaucoma Laboratory, Department of Ophthalmology, Columbia University, New York, NY, USA.

出版信息

Adv Exp Med Biol. 2025;1468:107-111. doi: 10.1007/978-3-031-76550-6_18.

Abstract

Mutations in the Eyes Shut Homolog (EYS) gene are associated with autosomal recessive retinitis pigmentosa (arRP). To date, four retinal isoforms of EYS have been identified. However, the precise retinal function of EYS is not fully understood, but it has apparent roles in retinal morphogenesis, architecture, and ciliary transport. Clustered-regularly interspaced palindromic repeats (CRISPR)/CRISPR-associated (Cas) nuclease-mediated approaches are powerful tools for genome engineering in mammalian cells. The use of paired CRISPR/Cas9-induced double-strand breaks (DSBs) using dual single guide RNAs (sgRNA) can lead to precise genomic deletions. In this study, we developed a dual sgRNA strategy to facilitate CRISPR/Cas9-mediated deletion of 1,988,210 bp of the EYS locus, removing the four currently identified human retinal EYS isoforms. This approach can be used to produce EYSdel induced pluripotent stem cell (iPSC) lines to explore the function of EYS in human iPSC-derived retinal organoids.

摘要

眼睛闭合同源物(EYS)基因突变与常染色体隐性视网膜色素变性(arRP)相关。迄今为止,已鉴定出EYS的四种视网膜异构体。然而,EYS在视网膜中的精确功能尚未完全了解,但它在视网膜形态发生、结构和睫状运输中具有明显作用。成簇规律间隔短回文重复序列(CRISPR)/CRISPR相关(Cas)核酸酶介导的方法是哺乳动物细胞基因组工程的强大工具。使用双单导向RNA(sgRNA)通过成对的CRISPR/Cas9诱导双链断裂(DSB)可导致精确的基因组缺失。在本研究中,我们开发了一种双sgRNA策略,以促进CRISPR/Cas9介导的EYS基因座1,988,210 bp的缺失,去除目前鉴定出的四种人类视网膜EYS异构体。该方法可用于产生EYSdel诱导多能干细胞(iPSC)系,以探索EYS在人iPSC来源的视网膜类器官中的功能。

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