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水溶液中没食子酸及其阴离子形式的p值计算:一种用于精确估计质子水合自由能的自相似变换方法。

Computation of the p Values of Gallic Acid and Its Anionic Forms in Aqueous Solution: A Self-Similar Transformation Approach for Accurate Proton Hydration Free Energy Estimation.

作者信息

Molski Marcin

机构信息

Department of Quantum Chemistry, Faculty of Chemistry, Adam Mickiewicz University of Poznań, ul. Uniwersytetu Poznańskiego 8, 61-614 Poznań, Poland.

出版信息

Molecules. 2025 Feb 6;30(3):742. doi: 10.3390/molecules30030742.

Abstract

The Gibbs free energies of gallic acid (GA) and its anionic forms in aqueous solution were computed utilizing density functional theory (DFT) at the LSDA, M062X, B3LYP/QZVP levels, in conjunction with the SMD solvation model. The p values corresponding to the four-step deprotonation of GA were determined through a non-linear self-similar transformation expressed as, p = a⋅p(the) which establishes a link between theoretical and experimental p values. This approach replaces the previously employed linear relationship, p = a⋅p(the) + b. The proposed model demonstrates high accuracy in reproducing the experimental p1 = 4.16 ± 0.02, p2 = 8.55 ± 0.01, p3 =11.40 ± 0.10, p4 =12.8 ± 0.40 values of GA, with a standard error (SE) of 0.045 and a mean absolute error (MAE) of 0.019 in p unit. Furthermore, it facilitates the precise determination of the Gibbs free energy of the proton hydration, yielding ∆G(H) = 259.4272(75) [kcal mol]. This result conforms acceptably with the experimental value of ∆G(H) = -259.5 [kcal mol].

摘要

利用密度泛函理论(DFT)在LSDA、M062X、B3LYP/QZVP水平下,结合SMD溶剂化模型,计算了没食子酸(GA)及其阴离子形式在水溶液中的吉布斯自由能。通过表示为p = a⋅p(the)的非线性自相似变换确定了与GA四步去质子化相对应的p值,该变换建立了理论p值与实验p值之间的联系。这种方法取代了先前采用的线性关系p = a⋅p(the)+ b。所提出的模型在重现GA的实验p1 = 4.16±0.02、p2 = 8.55±0.01、p3 = 11.40±0.10、p4 = 12.8±0.40值方面显示出高精度,在p单位下标准误差(SE)为0.045,平均绝对误差(MAE)为0.019。此外,它有助于精确测定质子水合的吉布斯自由能,得到∆G(H) = 259.4272(75) [kcal mol]。该结果与∆G(H) = -259.5 [kcal mol]的实验值相当吻合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2491/11820028/1a8725279b55/molecules-30-00742-g001.jpg

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