Martins Rafael Xavier, Gomes Cleyton, Carvalho Matheus, Souza Juliana Alves da Costa Ribeiro, Souza Terezinha, Farias Davi
Post-Graduation Program in Biochemistry, Department of Biochemistry and Molecular Biology, Federal University of Ceará Building 907, Campus Pici, Fortaleza 60455-970, Brazil; Laboratory for Risk Assessment of Novel Technologies, Department of Molecular Biology, Federal University of Paraiba, João Pessoa 58050-085, Brazil.
Laboratory for Risk Assessment of Novel Technologies, Department of Molecular Biology, Federal University of Paraiba, João Pessoa 58050-085, Brazil.
Toxicology. 2025 May;513:154086. doi: 10.1016/j.tox.2025.154086. Epub 2025 Feb 13.
The herbicide 2,4-dichlorophenoxyacetic acid (2,4-D) and its major environmental metabolite 2,4-dichlorophenol (2,4-DCP) are pollutants associated with hepatotoxicity, whose molecular mechanisms remain poorly understood. This study investigated the molecular pathways and targets involved in 2,4-D and 2,4-DCP-induced hepatotoxicity using protein-protein interaction (PPI) network analyses and molecular docking. Target genes were identified using PharmMapper and SwissTargetPrediction, and cross-referenced with hepatotoxicity-related genes from GeneCards and OMIM databases. The PPI network, constructed via STRING and visualized in Cytoscape, revealed 12 critical hub nodes, including HSP90AA1, RXRA, EGFR, SRC, CREBBP, PIK3R1, ESR1, AKT1, RAF1, IGF1R, MDM2, and MAPK14. Gene Ontology (GO) analysis indicated processes such as apoptosis, oxidative stress, mitochondrial dysfunction, and lipid metabolism impairment, while Reactome pathway analysis highlighted disruptions in PI3K/AKT and nuclear receptors signaling. Molecular docking confirmed significant interactions of 2,4-D and 2,4-DCP with key proteins, including SRC, AKT, RXRA, MDM2, and HSP90AA1. These results suggest that 2,4-D and 2,4-DCP share similar toxic mechanisms, providing new insights into their hepatotoxicity pathways for the first time.
除草剂2,4-二氯苯氧乙酸(2,4-D)及其主要环境代谢物2,4-二氯苯酚(2,4-DCP)是与肝毒性相关的污染物,其分子机制仍知之甚少。本研究使用蛋白质-蛋白质相互作用(PPI)网络分析和分子对接,研究了2,4-D和2,4-DCP诱导肝毒性所涉及的分子途径和靶点。使用PharmMapper和SwissTargetPrediction鉴定靶基因,并与来自GeneCards和OMIM数据库的肝毒性相关基因进行交叉参考。通过STRING构建并在Cytoscape中可视化的PPI网络揭示了12个关键枢纽节点,包括HSP90AA1、RXRA、EGFR、SRC、CREBBP、PIK3R1、ESR1、AKT1、RAF1、IGF1R、MDM2和MAPK14。基因本体(GO)分析表明存在凋亡、氧化应激、线粒体功能障碍和脂质代谢受损等过程,而Reactome通路分析突出了PI3K/AKT和核受体信号传导的破坏。分子对接证实了2,4-D和2,4-DCP与关键蛋白(包括SRC、AKT、RXRA、MDM2和HSP90AA1)之间存在显著相互作用。这些结果表明,2,4-D和2,4-DCP具有相似的毒性机制,首次为它们的肝毒性途径提供了新的见解。