Veron Pierre, Andréoletti Jérémy, Giraud Tatiana, Morlon Hélène
Institut de Biologie École Normale Supérieure, Université PSL, CNRS, INSERM, Paris 75005, France.
Écologie Systématique et Évolution, CNRS, Université Paris-Saclay, AgroParisTech, Gif-sur-Yvette 91190, France.
Philos Trans R Soc Lond B Biol Sci. 2025 Feb 13;380(1919):20230317. doi: 10.1098/rstb.2023.0317. Epub 2025 Feb 20.
Standard birth-death (BD) processes used in macroevolutionary studies assume instantaneous speciation, an unrealistic premise that limits the interpretation of speciation and extinction rates. The protracted birth-death (PBD) model instead assumes that speciation involves two steps: initiation and completion. In order to understand their respective influence on macroevolutionary speciation rates, we compute a standard time-varying BD scenario that is 'equivalent' to the PBD model in terms of speciation and extinction probabilities. First, we find a sharp decline in the equivalent birth rate near the present, indicating that rates estimated at the tips of phylogenies may not accurately reflect the underlying speciation process. Second, the completion rate controls the timing of the decay rather than the asymptotic equivalent rates. The equivalent birth rate in the past scales with the speciation initiation rate, with a scaling factor depending mostly on the population extinction rate. Our results suggest that the rates of population formation and extinction may often play a larger role than the speed of accumulation of reproductive isolation in modulating speciation rates. Our study establishes a theoretical framework for understanding how microevolutionary processes combine to explain the diversification of species on macroevolutionary time scales.This article is part of the theme issue '"A mathematical theory of evolution": phylogenetic models dating back 100 years'.
宏观进化研究中使用的标准生死(BD)过程假定物种形成是瞬间发生的,这是一个不切实际的前提,限制了对物种形成和灭绝速率的解释。相反,长期生死(PBD)模型假定物种形成涉及两个步骤:起始和完成。为了理解它们各自对宏观进化物种形成速率的影响,我们计算了一个标准的随时间变化的BD情景,该情景在物种形成和灭绝概率方面与PBD模型“等效”。首先,我们发现当前附近等效出生率急剧下降,这表明在系统发育树末端估计的速率可能无法准确反映潜在的物种形成过程。其次,完成速率控制衰减的时间,而不是渐近等效速率。过去的等效出生率与物种形成起始速率成比例,比例因子主要取决于种群灭绝速率。我们的结果表明,在调节物种形成速率方面,种群形成和灭绝速率可能往往比生殖隔离积累速度发挥更大作用。我们的研究建立了一个理论框架,用于理解微观进化过程如何结合起来解释宏观进化时间尺度上物种的多样化。本文是主题为“进化的数学理论”:可追溯到100年前的系统发育模型的一部分。