• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

空间转录组学揭示弥漫性大B细胞淋巴瘤中具有预后意义的LYZ成纤维细胞及其与FN1巨噬细胞的共定位。

Spatial transcriptomics reveals prognostically LYZ fibroblasts and colocalization with FN1 macrophages in diffuse large B-cell lymphoma.

作者信息

Dai Liyuan, Lou Ning, Huang Liling, Li Lin, Tang Le, Shi Yuankai, Han Xiaohong

机构信息

Department of Medical Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 17 Panjiayuan Nanli, Chaoyang District, Beijing, 100021, China.

Clinical Pharmacology Research Center, Peking Union Medical College Hospital, State Key Laboratory of Complex Severe and Rare Diseases, NMPA Key Laboratory for Clinical Research and Evaluation of Drug, Beijing Key Laboratory of Clinical PK & PD Investigation for Innovative Drugs, Chinese Academy of Medical Sciences & Peking Union Medical College, No.1, Shuaifuyuan, Dongcheng District, Beijing, 100730, China.

出版信息

Cancer Immunol Immunother. 2025 Feb 25;74(4):123. doi: 10.1007/s00262-025-03968-7.

DOI:10.1007/s00262-025-03968-7
PMID:39998673
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11861843/
Abstract

BACKGROUND

Diffuse large B-cell lymphoma (DLBCL) is a clinically heterogeneous malignancy with diverse patient outcomes, largely influenced by the tumor microenvironment (TME). Understanding the roles of fibroblasts and macrophages within the TME is essential for developing personalized therapeutic strategies in DLBCL.

METHODS

This study is a multi-omics approach, integrating spatial transcriptomics (n = 11), bulk transcriptomics (n = 2,499), immunohistochemistry (IHC, n = 37), multiplex immunofluorescence (mIF, n = 56), and plasma samples (n = 240) to identify and characterize fibroblast and tumor-associated macrophage subtypes in the TME. Hub genes for LYZ fibroblasts and FN1 macrophages were selected through univariate Cox regression and random forest analyses. Their prognostic significance was validated using IHC, mIF, and autoantibody assays in DLBCL patients treated with R-CHOP and in non-small cell lung cancer (NSCLC) patients receiving immune checkpoint inhibitors (ICIs).

RESULTS

Fibroblasts and macrophages were classified into two distinct subtypes. Patients with higher LYZ fibroblasts infiltration demonstrated superior prognosis, which was associated with increased infiltration of FN1 macrophages. Key hub genes identified for LYZ fibroblasts included LYZ, ANPEP, CSF3R, C15orf48, LILRB4, CLEC7A, and COL7A1, while hub FN1 macrophages genes included COL1A1, FN1, APOE, DCN, MMP2, SPP1, COL3A1, and COL1A2. Independent prognostic markers in DLBCL treated with R-CHOP and NSCLC treated with ICIs were identified, including LYZ and LILRB4 at both protein and mRNA levels, and COL1A2 autoantibodies (p < 0.05). In DLBCL patients treated with R-CHOP, FN1 mRNA and autoantibody levels were also prognostic markers (p < 0.05). In NSCLC treated with ICIs, COL3A1 autoantibody was prognostic marker (p < 0.05).

CONCLUSIONS

This study identified a prognostically relevant LYZ fibroblasts and FN1 macrophages in DLBCL. The hub genes associated with these subtypes represent potential biomarkers, providing insights into improving patient outcomes in DLBCL.

摘要

背景

弥漫性大B细胞淋巴瘤(DLBCL)是一种临床异质性恶性肿瘤,患者预后各异,很大程度上受肿瘤微环境(TME)影响。了解TME中成纤维细胞和巨噬细胞的作用对于制定DLBCL的个性化治疗策略至关重要。

方法

本研究采用多组学方法,整合空间转录组学(n = 11)、批量转录组学(n = 2499)、免疫组织化学(IHC,n = 37)、多重免疫荧光(mIF,n = 56)和血浆样本(n = 240),以识别和表征TME中的成纤维细胞和肿瘤相关巨噬细胞亚型。通过单变量Cox回归和随机森林分析选择LYZ成纤维细胞和FN1巨噬细胞的枢纽基因。使用IHC、mIF和自身抗体检测在接受R-CHOP治疗的DLBCL患者和接受免疫检查点抑制剂(ICI)治疗的非小细胞肺癌(NSCLC)患者中验证其预后意义。

结果

成纤维细胞和巨噬细胞分为两种不同的亚型。LYZ成纤维细胞浸润较高的患者预后较好,这与FN1巨噬细胞浸润增加有关。为LYZ成纤维细胞鉴定的关键枢纽基因包括LYZ、ANPEP、CSF3R、C15orf48、LILRB4、CLEC7A和COL7A1,而枢纽FN1巨噬细胞基因包括COL1A1、FN1、APOE、DCN、MMP2、SPP1、COL3A1和COL1A2。确定了接受R-CHOP治疗的DLBCL和接受ICI治疗的NSCLC中的独立预后标志物,包括蛋白质和mRNA水平的LYZ和LILRB4,以及COL1A2自身抗体(p < 0.05)。在接受R-CHOP治疗的DLBCL患者中,FN1 mRNA和自身抗体水平也是预后标志物(p < 0.05)。在接受ICI治疗的NSCLC中,COL3A1自身抗体是预后标志物(p < 0.05)。

结论

本研究在DLBCL中鉴定出与预后相关的LYZ成纤维细胞和FN1巨噬细胞。与这些亚型相关的枢纽基因代表潜在的生物标志物,为改善DLBCL患者的预后提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/96d97436dce3/262_2025_3968_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/d25accd21eeb/262_2025_3968_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/ed410c0e53c9/262_2025_3968_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/130689518a6c/262_2025_3968_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/4ed7b1e0ebb4/262_2025_3968_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/0ff6040c1c26/262_2025_3968_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/94754a48e443/262_2025_3968_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/96d97436dce3/262_2025_3968_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/d25accd21eeb/262_2025_3968_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/ed410c0e53c9/262_2025_3968_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/130689518a6c/262_2025_3968_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/4ed7b1e0ebb4/262_2025_3968_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/0ff6040c1c26/262_2025_3968_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/94754a48e443/262_2025_3968_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc7e/11861843/96d97436dce3/262_2025_3968_Fig7_HTML.jpg

相似文献

1
Spatial transcriptomics reveals prognostically LYZ fibroblasts and colocalization with FN1 macrophages in diffuse large B-cell lymphoma.空间转录组学揭示弥漫性大B细胞淋巴瘤中具有预后意义的LYZ成纤维细胞及其与FN1巨噬细胞的共定位。
Cancer Immunol Immunother. 2025 Feb 25;74(4):123. doi: 10.1007/s00262-025-03968-7.
2
Identification of intratumoral microbiome-driven immune modulation and therapeutic implications in diffuse large B-cell lymphoma.弥漫性大B细胞淋巴瘤中肿瘤内微生物群驱动的免疫调节及其治疗意义的鉴定
Cancer Immunol Immunother. 2025 Mar 3;74(4):131. doi: 10.1007/s00262-025-03972-x.
3
Implication of immune cell signature of tumor microenvironment in diffuse large B-cell lymphoma.肿瘤微环境中免疫细胞特征对弥漫性大 B 细胞淋巴瘤的影响。
Hematol Oncol. 2021 Dec;39(5):616-624. doi: 10.1002/hon.2905. Epub 2021 Jul 31.
4
Immune microenvironment-related gene mapping predicts immunochemotherapy response and prognosis in diffuse large B-cell lymphoma.免疫微环境相关基因图谱预测弥漫性大 B 细胞淋巴瘤的免疫化疗反应和预后。
Med Oncol. 2022 Jan 29;39(4):44. doi: 10.1007/s12032-021-01642-3.
5
Comprehensive Analysis of Single-Cell and Bulk Transcriptomics Identified Regulatory T-Cell Features as Predictors of Prognosis in Diffuse Large B-Cell Lymphoma.单细胞和批量转录组学的综合分析确定调节性T细胞特征可作为弥漫性大B细胞淋巴瘤预后的预测指标。
Hematol Oncol. 2025 Mar;43(2):e70050. doi: 10.1002/hon.70050.
6
Lipid metabolism-related gene signature predicts prognosis and unveils novel anti-tumor drugs in specific type of diffuse large B cell lymphoma.脂质代谢相关基因特征可预测预后,并揭示特定类型弥漫性大 B 细胞淋巴瘤的新型抗肿瘤药物。
Mol Med. 2024 Nov 13;30(1):210. doi: 10.1186/s10020-024-00988-4.
7
CCL8 as a promising prognostic factor in diffuse large B-cell lymphoma M2 macrophage interactions: A bioinformatic analysis of the tumor microenvironment.CCL8 在弥漫性大 B 细胞淋巴瘤 M2 巨噬细胞相互作用中作为一个有前途的预后因素:肿瘤微环境的生物信息学分析。
Front Immunol. 2022 Aug 22;13:950213. doi: 10.3389/fimmu.2022.950213. eCollection 2022.
8
Assessment of CD37 B-cell antigen and cell of origin significantly improves risk prediction in diffuse large B-cell lymphoma.评估CD37 B细胞抗原和起源细胞可显著改善弥漫性大B细胞淋巴瘤的风险预测。
Blood. 2016 Dec 29;128(26):3083-3100. doi: 10.1182/blood-2016-05-715094. Epub 2016 Oct 19.
9
Tumour-associated macrophages in diffuse large B-cell lymphoma: the prognostic and therapeutic impact in a South African centre with high HIV seroprevalence.弥漫性大B细胞淋巴瘤中的肿瘤相关巨噬细胞:在南非一个艾滋病毒血清阳性率高的中心的预后和治疗影响
Immunol Res. 2024 Dec;72(6):1393-1403. doi: 10.1007/s12026-024-09537-x. Epub 2024 Sep 11.
10
High PTX3 expression is associated with a poor prognosis in diffuse large B-cell lymphoma.高 PTX3 表达与弥漫性大 B 细胞淋巴瘤的不良预后相关。
Cancer Sci. 2022 Jan;113(1):334-348. doi: 10.1111/cas.15179. Epub 2021 Nov 29.

本文引用的文献

1
The Multifaceted Impact of Bioactive Lipids on Gut Health and Disease.生物活性脂质对肠道健康与疾病的多方面影响
Int J Mol Sci. 2024 Dec 20;25(24):13638. doi: 10.3390/ijms252413638.
2
Integrative Analysis Identifies NSUN2 as an Essential Coordinator for Glioma Malignancy and Glucose Metabolism.综合分析确定NSUN2是胶质瘤恶性进展和葡萄糖代谢的关键协调因子。
J Gene Med. 2024 Dec;26(12):e70004. doi: 10.1002/jgm.70004.
3
Epithelial CEBPD activates fibronectin and enhances macrophage adhesion in renal ischemia-reperfusion injury.上皮细胞CEBPD激活纤连蛋白并增强肾缺血再灌注损伤中的巨噬细胞黏附。
Cell Death Discov. 2024 Jul 18;10(1):328. doi: 10.1038/s41420-024-02082-4.
4
Depleting profibrotic macrophages using bioactivated in vivo assembly peptides ameliorates kidney fibrosis.利用生物激活的体内组装肽耗竭致纤维化巨噬细胞可改善肾脏纤维化。
Cell Mol Immunol. 2024 Aug;21(8):826-841. doi: 10.1038/s41423-024-01190-6. Epub 2024 Jun 13.
5
Single-cell and spatial transcriptomics reveal a high glycolysis B cell and tumor-associated macrophages cluster correlated with poor prognosis and exhausted immune microenvironment in diffuse large B-cell lymphoma.单细胞和空间转录组学揭示了弥漫性大B细胞淋巴瘤中一个与预后不良和免疫微环境耗竭相关的高糖酵解B细胞和肿瘤相关巨噬细胞簇。
Biomark Res. 2024 Jun 5;12(1):58. doi: 10.1186/s40364-024-00605-w.
6
Tumor and Peritoneum-Associated Macrophage Gene Signature as a Novel Molecular Biomarker in Gastric Cancer.肿瘤和腹膜相关巨噬细胞基因特征作为胃癌的一种新型分子生物标志物。
Int J Mol Sci. 2024 Apr 8;25(7):4117. doi: 10.3390/ijms25074117.
7
High-Throughput Antigen Microarray Identifies Longitudinal Prognostic Autoantibody for Chemoimmunotherapy in Advanced Non-Small Cell Lung Cancer.高通量抗原微阵列鉴定晚期非小细胞肺癌化疗免疫治疗的纵向预后自身抗体。
Mol Cell Proteomics. 2024 May;23(5):100749. doi: 10.1016/j.mcpro.2024.100749. Epub 2024 Mar 20.
8
Lysozyme promotes renal fibrosis through the JAK/STAT3 signal pathway in diabetic nephropathy.溶菌酶通过JAK/STAT3信号通路促进糖尿病肾病中的肾纤维化。
Arch Med Sci. 2023 Jul 31;20(1):233-247. doi: 10.5114/aoms/170160. eCollection 2024.
9
Prediction significance of autophagy-related genes in survival probability and drug resistance in diffuse large B-cell lymphoma.自噬相关基因对弥漫性大B细胞淋巴瘤生存概率和耐药性的预测意义
Aging (Albany NY). 2024 Jan 17;16(2):1049-1076. doi: 10.18632/aging.205282.
10
Identification of novel prognostic autoantibodies in diffuse large B-cell lymphoma treated with rituximab plus cyclophosphamide, doxorubicin, vincristine, and prednisone via a high-throughput antigen microarray.通过高通量抗原微阵列鉴定利妥昔单抗联合环磷酰胺、多柔比星、长春新碱和泼尼松治疗弥漫性大 B 细胞淋巴瘤的新型预后自身抗体。
Cancer. 2024 Apr 15;130(8):1257-1269. doi: 10.1002/cncr.35158. Epub 2023 Dec 22.