Ahmed Shakeel, Naqvi Syed Muhammad Zaigham Abbas, Awais Muhammad, Ren Yongzhe, Zhang Hao, Wu Junfeng, Li Linze, Raghavan Vijaya, Hu Jiandong
College of Mechanical and Electrical Engineering, Henan Agricultural University, Zhengzhou, 450002, China.
Henan International Joint Laboratory of Laser Technology in Agriculture Sciences, Zhengzhou, 450002, China.
BMC Bioinformatics. 2025 Feb 25;26(1):64. doi: 10.1186/s12859-025-06082-8.
Understanding plant hormonal responses to stress and their transport dynamics remains challenging, limiting advancements in enhancing plant resilience. Our study presents a novel approach that utilizes genetically engineered bacteria (GEB) as molecular transceivers within plants, aiming to develop revolutionary agricultural biosensors. We focus on abscisic acid (ABA), a key hormone for plant growth and stress response. We propose using Escherichia coli (E. coli) engineered with PYR1-derived receptors that exhibit high affinity for ABA, triggering a bioluminescent response. Simulations investigate the detection time for ABA, bacterial diffusion within plant roots, advection effects through shoots, and chemotaxis in response to attractant gradients in leaves. Results indicate that higher ABA concentrations correlate with shorter response times, with an average of 431.52 s based on bioluminescence. The average internalization time for bacteria through a plant root area of 2 µm during the rhizophagy process is estimated at 1220.12 s. Simulations also assess bacterial movement through shoots, the impact of advection, and chemotactic responses. These findings highlight the complex interplay between plant signaling and microbial communities, validating the efficacy of our bacterial-based sensor approach and opening new avenues for agricultural biosensor technology.
了解植物激素对胁迫的反应及其运输动态仍然具有挑战性,这限制了增强植物恢复力方面的进展。我们的研究提出了一种新方法,利用基因工程细菌(GEB)作为植物体内的分子收发器,旨在开发革命性的农业生物传感器。我们聚焦于脱落酸(ABA),这是一种对植物生长和胁迫反应起关键作用的激素。我们提议使用经过工程改造的大肠杆菌(E. coli),其带有对ABA具有高亲和力的PYR1衍生受体,可触发生物发光反应。模拟研究了ABA的检测时间、细菌在植物根部的扩散、通过茎部的平流效应以及对叶片中吸引剂梯度的趋化反应。结果表明,较高的ABA浓度与较短的反应时间相关,基于生物发光的平均反应时间为431.52秒。在噬根过程中,细菌穿过2微米植物根部区域的平均内化时间估计为1220.12秒。模拟还评估了细菌通过茎部的移动、平流的影响以及趋化反应。这些发现突出了植物信号传导与微生物群落之间复杂的相互作用,验证了我们基于细菌的传感器方法的有效性,并为农业生物传感器技术开辟了新途径。