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TRIM66-HP1γ通过相分离重塑染色质。

TRIM66-HP1γ remodels the chromatin through phase separation.

作者信息

Shen Siyuan, Chen Feng, Zhang Yifan, Li Fudong, Yao Xuebiao, Liu Dan, Shi Yunyu, Zhang Liang

机构信息

Center for Advanced Interdisciplinary Science and Biomedicine of IHM, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230027, China.

Ministry of Education Key Laboratory for Membraneless Organelles and Cellular Dynamics, University of Science and Technology of China, Hefei 230027, China.

出版信息

Biophys Rep. 2025 Feb 28;11(1):18-33. doi: 10.52601/bpr.2024.240038.

Abstract

Chromatin contains not only heterochromatin (HC) and euchromatins (EC) but also facultative heterochromatin (fHC), which experience the dynamic remodeling between HCs and ECs by different regulators. The regulation of fHCs involves lots of different cell functions, like genomic stability and gene transcription. Heterochromatin protein 1 (HP1) recognizes methylated H3K9 and reshapes the chromatin into the fHCs through liquid-liquid phase separation (LLPS). Among the three members of the HP1 family, HP1α can condensate by itself and HP1β forms granules with the help of TRIM28, while the HP1γ cannot phase separation alone either and the coordinator is still unclear. So, in this study, we investigated the molecular mechanism of how HP1γ interacts with TRIM66 through PxVxL motif. Based on that, we examined the key regions that controlled the TRIM66-HP1γ co-phase separation behaviors both and . Furthermore, we proved that the liquid granules of TRIM66-HP1γ and chromatin highly correlated with H3K9me3 sites, which indicated the relationship with DNA damage response. Finally, combined with our previous study, we proposed the system for how TRIM66 remodeled the chromatin into compressed fHC through the TRIM66-HP1γ-H3K9me3 axis with liquid-liquid phase separation.

摘要

染色质不仅包含异染色质(HC)和常染色质(EC),还包含兼性异染色质(fHC),fHC会通过不同调节因子在HC和EC之间经历动态重塑。fHC的调节涉及许多不同的细胞功能,如基因组稳定性和基因转录。异染色质蛋白1(HP1)识别甲基化的H3K9,并通过液-液相分离(LLPS)将染色质重塑为fHC。在HP1家族的三个成员中,HP1α可以自行凝聚,HP1β在TRIM28的帮助下形成颗粒,而HP1γ也不能单独进行相分离,其协调因子仍不清楚。因此,在本研究中,我们研究了HP1γ如何通过PxVxL基序与TRIM66相互作用的分子机制。在此基础上,我们研究了控制TRIM66-HP1γ共相分离行为的关键区域。此外,我们证明了TRIM66-HP1γ的液体颗粒与染色质与H3K9me3位点高度相关,这表明了其与DNA损伤反应的关系。最后,结合我们之前的研究,我们提出了TRIM66如何通过TRIM66-HP1γ-H3K9me3轴以液-液相分离将染色质重塑为压缩fHC的系统。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4942/11891075/0ab2cc787c2b/br-11-1-18-1.jpg

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