• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于Voigt峰补偿的自适应拉曼光谱解混方法用于细胞生化成分的定量分析。

Adaptive Raman spectral unmixing method based on Voigt peak compensation for quantitative analysis of cellular biochemical components.

作者信息

Chen Xiang, Tang Ping, Wan Jianhui, Zhang Weina, Zhong Liyun

机构信息

Key Laboratory of Photonics Technology for Integrated Sensing and Communication of Ministry of Education, Guangdong University of Technology, Guangzhou 510006, China.

Guangdong Provincial Key Laboratory of Information Photonics Technology, Guangdong University of Technology, Guangzhou 510006, China.

出版信息

Biomed Opt Express. 2025 Feb 28;16(3):1284-1298. doi: 10.1364/BOE.553461. eCollection 2025 Mar 1.

DOI:10.1364/BOE.553461
PMID:40109542
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11919365/
Abstract

Raman spectroscopy, with its unique "molecular fingerprint" characteristics, is an essential tool for label-free, non-invasive biochemical analysis of cells. It provides precise information on cellular biochemical components, such as proteins, lipids, and nucleic acids by analyzing molecular vibrational modes. However, overlapping Raman spectral signals make spectral unmixing crucial for accurate quantification. Traditional unmixing methods face challenges: unsupervised algorithms yield poorly interpretable results, while supervised methods like BCA rely heavily on accurate reference spectra and are sensitive to environmental changes (e.g., pH, temperature, excitation wavelength), causing spectral distortion and reducing quantitative reliability. This study addresses these challenges by introducing a parameterized Voigt function into the linear spectral mixing model for element spectrum compensation, using iterative least-squares optimization for adaptive unmixing and quantitative analysis. Simulations show that the Voigt-compensated unmixing algorithm improves spectral fitting accuracy and robustness. Applied to Raman spectra from Hela cell apoptosis and iPSCs differentiation, the algorithm accurately tracks biochemical molecular changes, proving its applicability in cellular Raman spectral analysis and a precise, reliable, and versatile tool for quantitative biochemical analysis.

摘要

拉曼光谱凭借其独特的“分子指纹”特性,是用于对细胞进行无标记、非侵入性生化分析的重要工具。它通过分析分子振动模式,提供有关细胞生化成分(如蛋白质、脂质和核酸)的精确信息。然而,拉曼光谱信号的重叠使得光谱解混对于准确量化至关重要。传统的解混方法面临挑战:无监督算法产生的结果难以解释,而像BCA这样的监督方法严重依赖准确的参考光谱,并且对环境变化(如pH值、温度、激发波长)敏感,会导致光谱失真并降低定量可靠性。本研究通过将参数化的洛伦兹函数引入线性光谱混合模型进行元素光谱补偿,使用迭代最小二乘法优化进行自适应解混和定量分析来应对这些挑战。模拟表明,洛伦兹补偿解混算法提高了光谱拟合精度和鲁棒性。将该算法应用于来自Hela细胞凋亡和诱导多能干细胞分化的拉曼光谱,该算法准确跟踪生化分子变化,证明了其在细胞拉曼光谱分析中的适用性,是一种用于定量生化分析的精确、可靠且通用的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/c5ad7eeaff0c/boe-16-3-1284-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/a55be91553b8/boe-16-3-1284-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/a91e903de25f/boe-16-3-1284-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/d3ba63d17169/boe-16-3-1284-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/98d67eb8fabc/boe-16-3-1284-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/919870e8d9a3/boe-16-3-1284-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/3aa4332db8bf/boe-16-3-1284-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/c5ad7eeaff0c/boe-16-3-1284-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/a55be91553b8/boe-16-3-1284-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/a91e903de25f/boe-16-3-1284-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/d3ba63d17169/boe-16-3-1284-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/98d67eb8fabc/boe-16-3-1284-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/919870e8d9a3/boe-16-3-1284-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/3aa4332db8bf/boe-16-3-1284-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55b1/11919365/c5ad7eeaff0c/boe-16-3-1284-g007.jpg

相似文献

1
Adaptive Raman spectral unmixing method based on Voigt peak compensation for quantitative analysis of cellular biochemical components.基于Voigt峰补偿的自适应拉曼光谱解混方法用于细胞生化成分的定量分析。
Biomed Opt Express. 2025 Feb 28;16(3):1284-1298. doi: 10.1364/BOE.553461. eCollection 2025 Mar 1.
2
Efficient quantitative hyperspectral image unmixing method for large-scale Raman micro-spectroscopy data analysis.高效定量高光谱图像解混方法在大规模拉曼显微光谱数据分析中的应用。
Anal Chim Acta. 2019 Mar 7;1050:32-43. doi: 10.1016/j.aca.2018.11.018. Epub 2018 Nov 13.
3
Raman Labeled Nanoparticles: Characterization of Variability and Improved Method for Unmixing.拉曼标记纳米颗粒:变异性表征及改进的解混方法
J Raman Spectrosc. 2012 Jul 1;43(7):895-905. doi: 10.1002/jrs.3114.
4
Quantitative linear unmixing of CFP and YFP from spectral images acquired with two-photon excitation.从双光子激发获取的光谱图像中对CFP和YFP进行定量线性解混。
Cytometry A. 2006 Aug 1;69(8):904-11. doi: 10.1002/cyto.a.20267.
5
Assessment of unmixing approaches for the quantitation of SERS nanoparticles in highly multiplexed spectral images.用于在高度多重光谱图像中定量表面增强拉曼散射(SERS)纳米颗粒的解混方法评估。
J Raman Spectrosc. 2024 May;55(5):566-580. doi: 10.1002/jrs.6653. Epub 2024 Jan 22.
6
Hyperspectral unmixing of Raman micro-images for assessment of morphological and chemical parameters in non-dried brain tumor specimens.拉曼微图像的高光谱解混用于评估未干燥脑肿瘤标本的形态和化学参数。
Anal Bioanal Chem. 2013 Nov;405(27):8719-28. doi: 10.1007/s00216-013-7257-7. Epub 2013 Aug 11.
7
Superior robustness of ExEm-spFRET to IIem-spFRET method in live-cell FRET measurement.在活细胞 FRET 测量中,ExEm-spFRET 比 IIem-spFRET 方法具有更高的稳健性。
J Microsc. 2018 Nov;272(2):145-150. doi: 10.1111/jmi.12755. Epub 2018 Sep 14.
8
An Interlaboratory Study to Minimize Wavelength Calibration Uncertainty Due to Peak Fitting of Reference Material Spectra in Raman Spectroscopy.一项旨在最小化拉曼光谱中参考物质光谱峰拟合导致的波长校准不确定度的实验室间研究。
Appl Spectrosc. 2025 Apr 24:37028251330654. doi: 10.1177/00037028251330654.
9
Hyperspectral unmixing for Raman spectroscopy via physics-constrained autoencoders.通过物理约束自动编码器实现拉曼光谱的高光谱解混
Proc Natl Acad Sci U S A. 2024 Nov 5;121(45):e2407439121. doi: 10.1073/pnas.2407439121. Epub 2024 Oct 29.
10
Unsupervised unmixing of Raman microspectroscopic images for morphochemical analysis of non-dried brain tumor specimens.无监督拉曼显微光谱图像分解用于非干燥脑肿瘤标本的形态化学分析。
Anal Bioanal Chem. 2012 May;403(3):719-25. doi: 10.1007/s00216-012-5858-1. Epub 2012 Feb 26.

本文引用的文献

1
DHM/SERS reveals cellular morphology and molecular changes during iPSCs-derived activation of astrocytes.暗场显微镜/表面增强拉曼光谱揭示了诱导多能干细胞衍生的星形胶质细胞激活过程中的细胞形态和分子变化。
Biomed Opt Express. 2024 May 31;15(6):4010-4023. doi: 10.1364/BOE.524356. eCollection 2024 Jun 1.
2
Rapid and accurate identification of stem cell differentiation stages via SERS and convolutional neural networks.通过表面增强拉曼光谱(SERS)和卷积神经网络快速准确地识别干细胞分化阶段。
Biomed Opt Express. 2024 Apr 2;15(5):2753-2766. doi: 10.1364/BOE.519093. eCollection 2024 May 1.
3
Metabolic Rewiring and Altered Glial Differentiation in an iPSC-Derived Astrocyte Model Derived from a Nonketotic Hyperglycinemia Patient.
源自非酮症高甘氨酸血症患者的诱导多能干细胞衍生星形胶质细胞模型中的代谢重编程与胶质细胞分化改变
Int J Mol Sci. 2024 Feb 28;25(5):2814. doi: 10.3390/ijms25052814.
4
Rapid and accurate identification of marine bacteria spores at a single-cell resolution by laser tweezers Raman spectroscopy and deep learning.利用激光镊子拉曼光谱和深度学习以单细胞分辨率快速准确地鉴定海洋细菌孢子。
J Biophotonics. 2024 May;17(5):e202300510. doi: 10.1002/jbio.202300510. Epub 2024 Feb 1.
5
Noise learning of instruments for high-contrast, high-resolution and fast hyperspectral microscopy and nanoscopy.用于高对比度、高分辨率和快速超光谱显微镜及纳米显微镜的仪器的噪声学习
Nat Commun. 2024 Jan 25;15(1):754. doi: 10.1038/s41467-024-44864-5.
6
Rapid, label-free classification of glioblastoma differentiation status combining confocal Raman spectroscopy and machine learning.结合共聚焦拉曼光谱和机器学习,实现胶质母细胞瘤分化状态的快速、无标记分类。
Analyst. 2023 Nov 20;148(23):6109-6119. doi: 10.1039/d3an01303k.
7
A Universal and Accurate Method for Easily Identifying Components in Raman Spectroscopy Based on Deep Learning.基于深度学习的拉曼光谱中轻松识别成分的通用且精确的方法。
Anal Chem. 2023 Mar 21;95(11):4863-4870. doi: 10.1021/acs.analchem.2c03853. Epub 2023 Mar 12.
8
Rapid, label-free histopathological diagnosis of liver cancer based on Raman spectroscopy and deep learning.基于拉曼光谱和深度学习的肝癌快速无标记组织病理学诊断。
Nat Commun. 2023 Jan 4;14(1):48. doi: 10.1038/s41467-022-35696-2.
9
Accurate identification of living Bacillus spores using laser tweezers Raman spectroscopy and deep learning.利用激光镊子拉曼光谱和深度学习技术准确识别活芽孢杆菌孢子。
Spectrochim Acta A Mol Biomol Spectrosc. 2023 Mar 15;289:122216. doi: 10.1016/j.saa.2022.122216. Epub 2022 Dec 7.
10
SERS Tags for Biomedical Detection and Bioimaging.用于生物医学检测和生物成像的 SERS 标签
Theranostics. 2022 Jan 24;12(4):1870-1903. doi: 10.7150/thno.66859. eCollection 2022.