Jia Hongling, Bian Yanjie, Yuan Jie, Zhang Yi, Zhang Shengyi
Department of Thoracic Surgery, Songjiang Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, 201600, China.; The first clinical medical college of Shandong university of Traditional Chinese Medicine, Jinan, China.
Xinxiang Medical University, Xinxiang, China.
Transl Oncol. 2025 May;55:102364. doi: 10.1016/j.tranon.2025.102364. Epub 2025 Mar 22.
Lung adenocarcinoma (LUAD) posed a significant threat to global human health. This study employed single-cell RNA sequencing (scRNA-seq) to analyze transcriptomic data from nine LUAD patients at different stages of tumor infiltration, aiming to elucidate the tumor microenvironment and key biological processes of LUAD.
In this study, we processed the scRNA-seq data using the Seurat package and sequentially applied principal component analysis followed by the Harmony package to effectively correct for batch effects, identifying 105,725 high-quality cells. Through cell clustering and gene expression profiling, we identified critical cell subpopulations and gene expression patterns in LUAD patients.
Our analysis revealed that the C4 MYH11+ Fibroblasts subtype was primarily involved in biological processes related to muscle function. Further investigations uncovered the MDK-SDC2 ligand-receptor pair as a critical regulator of tumor cell invasion, proliferation, and migration, driving LUAD progression. Additionally, we developed a gene-based prognostic model that effectively predicted patient survival, providing valuable clinical insights.
This study provided a comprehensive atlas of the LUAD tumor microenvironment, highlighted the role of the C4 MYH11+ Fibroblasts in tumor progression. It also proposed the MDK-SDC2 ligand-receptor pair as a novel mechanism, addressing a significant gap in this area of research. And presented a gene-based prognostic model as a novel perspective for research into immunotherapy and drug sensitivity in LUAD.
肺腺癌(LUAD)对全球人类健康构成重大威胁。本研究采用单细胞RNA测序(scRNA-seq)分析9例处于肿瘤浸润不同阶段的LUAD患者的转录组数据,旨在阐明LUAD的肿瘤微环境和关键生物学过程。
在本研究中,我们使用Seurat软件包处理scRNA-seq数据,并依次应用主成分分析,随后使用Harmony软件包有效校正批次效应,识别出105,725个高质量细胞。通过细胞聚类和基因表达谱分析,我们确定了LUAD患者中的关键细胞亚群和基因表达模式。
我们的分析表明,C4 MYH11+成纤维细胞亚型主要参与与肌肉功能相关的生物学过程。进一步研究发现MDK-SDC2配体-受体对是肿瘤细胞侵袭、增殖和迁移的关键调节因子,驱动LUAD进展。此外,我们开发了一种基于基因的预后模型,可有效预测患者生存,提供有价值的临床见解。
本研究提供了LUAD肿瘤微环境的综合图谱,突出了C4 MYH11+成纤维细胞在肿瘤进展中的作用。还提出MDK-SDC2配体-受体对作为一种新机制,填补了该研究领域的重大空白。并提出了一种基于基因的预后模型,作为LUAD免疫治疗和药物敏感性研究的新视角。