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谷胱甘肽 - S - 转移酶超家族:一个对各种环境非生物胁迫产生不同响应的生态旁系同源基因网络以及纤毛虫中该基因家族的最新情况

glutathione-S-transferase superfamily: an eco-paralogs gene network differentially responding to various environmental abiotic stressors and an update on this gene family in ciliates.

作者信息

Ortega Ruth, Martin-González Ana, Gutiérrez Juan-Carlos

机构信息

Department of Genetics, Physiology and Microbiology, Faculty of Biology, Complutense University of Madrid, Madrid, Spain.

出版信息

Front Genet. 2025 Mar 7;16:1538168. doi: 10.3389/fgene.2025.1538168. eCollection 2025.

Abstract

Glutathione S-transferases constitute a superfamily of enzymes involved mainly, but not exclusively, in the detoxification of xenobiotic compounds that are considered environmental pollutants. In this work, an updated analysis of putative cytosolic glutathione S-transferases (cGST) from ciliate protozoa is performed although this analysis is mainly focused on . Among ciliates, the genus has the highest number (58 on average) of cGST genes. As in mammals, the Mu class of cGST is present in all analyzed ciliates and is the majority class in species. After an analysis of the occurrence of GST domains in , out of the 54 GSTs previously considered to be Mu class, six of them have been discarded as they do not have recognizable GST domains. In addition, there is one GST species-specific and another GST-EF1G (elongation factor 1 gamma). A structural analysis of GSTs has shown a wide variety of β-sheets/α-helix patterns, one of the most abundant being the canonical thioredoxin-folding pattern. Within the categories of bZIP and C4 zinc finger transcription factors, potential binding sites for c-Jun and c-Fos are abundant (32% as average), along with GATA-1 (71% average) in the GST gene promoters. The alignment of all MAPEG (Membrane Associated Proteins involved in Eicosanoid and Glutathione metabolism) GST protein sequences from species shows that this family is divided into two well-defined clans. The phylogenetic analysis of GSTs has shown that a cluster of 19 Mu-class GST genes are phylogenetic predecessors of members from the omega, theta and zeta classes. This means that the current GST phylogenetic model needs to be modified. Sixteen GST genes, together with two clusters including three genes each with very high identity, have been selected for qRT-PCR analysis under stress from eleven different environmental stressors. This analysis has revealed that there are GST genes that respond selectively and/or differentially to each stressor, independently of the GST class to which it belongs. Most of them respond to the two more toxic metal(loid)s used (Cd or As).

摘要

谷胱甘肽S-转移酶构成了一个酶的超家族,主要但并非唯一地参与外源性化合物的解毒,这些外源性化合物被视为环境污染物。在这项工作中,对纤毛虫原生动物中假定的胞质谷胱甘肽S-转移酶(cGST)进行了更新分析,尽管该分析主要集中在……。在纤毛虫中,[属名]属的cGST基因数量最多(平均58个)。与哺乳动物一样,Mu类cGST存在于所有分析的纤毛虫中,并且在[物种名]物种中是主要类别。在对[属名]中GST结构域的出现情况进行分析后,在先前被认为是Mu类的54个GST中,有6个因没有可识别的GST结构域而被排除。此外,有一个GST是物种特异性的,还有一个GST-EF1G(延伸因子1γ)。对[属名]GST的结构分析显示出多种β-折叠/α-螺旋模式,其中最丰富的一种是典型的硫氧还蛋白折叠模式。在bZIP和C4锌指转录因子类别中,c-Jun和c-Fos的潜在结合位点丰富(平均32%),[属名]GST基因启动子中GATA-1的潜在结合位点也很丰富(平均71%)。来自[物种名]物种的所有MAPEG(参与类花生酸和谷胱甘肽代谢的膜相关蛋白)GST蛋白序列的比对表明,该家族分为两个界限分明的家族。对[属名]GST的系统发育分析表明,一组19个Mu类GST基因是ω、θ和ζ类成员的系统发育前身。这意味着当前的GST系统发育模型需要修改。已选择16个[属名]GST基因,以及两个各包含三个具有非常高同一性的基因的簇,用于在来自11种不同环境应激源的胁迫下进行qRT-PCR分析。该分析表明,存在对每种应激源有选择性和/或差异性反应的GST基因,而与它所属的GST类别无关。它们中的大多数对所使用的两种毒性更强的金属(类金属)(镉或砷)有反应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a89/11925944/716c546b90b2/fgene-16-1538168-g001.jpg

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