• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于恶性疟原虫感染红细胞动态过程连续单细胞成像的深度学习图像分析

Deep learning image analysis for continuous single-cell imaging of dynamic processes in Plasmodium falciparum-infected erythrocytes.

作者信息

Frangos Sophia M, Damrich Sebastian, Gueiber Daniele, Sanchez Cecilia P, Wiedemann Philipp, Schwarz Ulrich S, Hamprecht Fred A, Lanzer Michael

机构信息

Heidelberg University, Medical Faculty, University Hospital Heidelberg, Center for Infectious Diseases, Parasitology, Im Neuenheimer Feld 324, Heidelberg, Germany.

Heidelberg University, Interdisciplinary Center for Scientific Computing (IWR), Im Neuenheimer Feld 205, Heidelberg, Germany.

出版信息

Commun Biol. 2025 Mar 25;8(1):487. doi: 10.1038/s42003-025-07894-3.

DOI:10.1038/s42003-025-07894-3
PMID:40133663
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11937545/
Abstract

Continuous high-resolution imaging of the disease-mediating blood stages of the human malaria parasite Plasmodium falciparum faces challenges due to photosensitivity, small parasite size, and the anisotropy and large refractive index of host erythrocytes. Previous studies often relied on snapshot galleries from multiple cells, limiting the investigation of dynamic cellular processes. We present a workflow enabling continuous, single-cell monitoring of live parasites throughout the 48-hour intraerythrocytic life cycle with high spatial and temporal resolution. This approach integrates label-free, three-dimensional differential interference contrast and fluorescence imaging using an Airyscan microscope, automated cell segmentation through pre-trained deep-learning algorithms, and 3D rendering for visualization and time-resolved analyses. As a proof of concept, we applied this workflow to study knob-associated histidine-rich protein (KAHRP) export into the erythrocyte compartment and its clustering beneath the plasma membrane. Our methodology opens avenues for in-depth exploration of dynamic cellular processes in malaria parasites, providing a valuable tool for further investigations.

摘要

由于疟原虫的光敏性、寄生虫尺寸小以及宿主红细胞的各向异性和大折射率,对人类疟原虫恶性疟原虫介导疾病的血液阶段进行连续高分辨率成像面临挑战。以往的研究通常依赖于多个细胞的快照图库,限制了对动态细胞过程的研究。我们提出了一种工作流程,能够在48小时的红细胞内生命周期中以高空间和时间分辨率对活寄生虫进行连续的单细胞监测。这种方法集成了使用Airyscan显微镜的无标记三维微分干涉对比和荧光成像、通过预训练的深度学习算法进行自动细胞分割以及用于可视化和时间分辨分析的三维渲染。作为概念验证,我们应用此工作流程研究富含组氨酸的旋钮相关蛋白(KAHRP)输出到红细胞区室及其在质膜下的聚集。我们的方法为深入探索疟原虫的动态细胞过程开辟了道路,为进一步研究提供了有价值的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/dd0a482ce08a/42003_2025_7894_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/4ef9fcd218fc/42003_2025_7894_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/d323f4d292f1/42003_2025_7894_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/e376a5d0c12f/42003_2025_7894_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/b57f29ff3871/42003_2025_7894_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/e3673c1ec919/42003_2025_7894_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/ba1398f4b58e/42003_2025_7894_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/dd0a482ce08a/42003_2025_7894_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/4ef9fcd218fc/42003_2025_7894_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/d323f4d292f1/42003_2025_7894_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/e376a5d0c12f/42003_2025_7894_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/b57f29ff3871/42003_2025_7894_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/e3673c1ec919/42003_2025_7894_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/ba1398f4b58e/42003_2025_7894_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0639/11937545/dd0a482ce08a/42003_2025_7894_Fig7_HTML.jpg

相似文献

1
Deep learning image analysis for continuous single-cell imaging of dynamic processes in Plasmodium falciparum-infected erythrocytes.用于恶性疟原虫感染红细胞动态过程连续单细胞成像的深度学习图像分析
Commun Biol. 2025 Mar 25;8(1):487. doi: 10.1038/s42003-025-07894-3.
2
Live-cell fluorescence imaging of microgametogenesis in the human malaria parasite Plasmodium falciparum.人类疟原虫(Plasmodium falciparum)小配子发生的活细胞荧光成像。
PLoS Pathog. 2022 Feb 7;18(2):e1010276. doi: 10.1371/journal.ppat.1010276. eCollection 2022 Feb.
3
Interaction of Plasmodium falciparum knob-associated histidine-rich protein (KAHRP) with erythrocyte ankyrin R is required for its attachment to the erythrocyte membrane.恶性疟原虫的富含组氨酸的 knobs 相关蛋白(KAHRP)与红细胞锚蛋白 R 的相互作用是其附着于红细胞膜所必需的。
Biochim Biophys Acta. 2014 Jan;1838(1 Pt B):185-92. doi: 10.1016/j.bbamem.2013.09.014. Epub 2013 Sep 30.
4
The role of KAHRP domains in knob formation and cytoadherence of P falciparum-infected human erythrocytes.KAHRP结构域在恶性疟原虫感染的人类红细胞的凸起形成和细胞黏附中的作用。
Blood. 2006 Jul 1;108(1):370-8. doi: 10.1182/blood-2005-11-4624. Epub 2006 Feb 28.
5
Vesicle-mediated trafficking of parasite proteins to the host cell cytosol and erythrocyte surface membrane in Plasmodium falciparum infected erythrocytes.恶性疟原虫感染的红细胞中囊泡介导的寄生虫蛋白向宿主细胞质和红细胞表面膜的运输。
Int J Parasitol. 2001 Oct;31(12):1381-91. doi: 10.1016/s0020-7519(01)00256-9.
6
Dramatic Consequences of Reducing Erythrocyte Membrane Cholesterol on Plasmodium falciparum.红细胞膜胆固醇减少对恶性疟原虫的戏剧性后果。
Microbiol Spectr. 2022 Feb 23;10(1):e0015822. doi: 10.1128/spectrum.00158-22.
7
Tetracysteine-based fluorescent tags to study protein localization and trafficking in Plasmodium falciparum-infected erythrocytes.基于四半胱氨酸的荧光标签用于研究恶性疟原虫感染红细胞中蛋白质的定位和转运。
PLoS One. 2011;6(8):e22975. doi: 10.1371/journal.pone.0022975. Epub 2011 Aug 10.
8
Plasmodium falciparum-infected erythrocyte knob density is linked to the PfEMP1 variant expressed.恶性疟原虫感染的红细胞结蛋白密度与所表达的PfEMP1变体有关。
mBio. 2015 Oct 6;6(5):e01456-15. doi: 10.1128/mBio.01456-15.
9
Protein Modification Characteristics of the Malaria Parasite Plasmodium falciparum and the Infected Erythrocytes.疟原虫恶性疟原虫和感染的红细胞的蛋白修饰特征。
Mol Cell Proteomics. 2021;20:100001. doi: 10.1074/mcp.RA120.002375. Epub 2020 Nov 24.
10
Binding Heterogeneity of Plasmodium falciparum to Engineered 3D Brain Microvessels Is Mediated by EPCR and ICAM-1.恶性疟原虫与工程化 3D 脑微血管的结合异质性受 EPCR 和 ICAM-1 介导。
mBio. 2019 May 28;10(3):e00420-19. doi: 10.1128/mBio.00420-19.

本文引用的文献

1
Atlas of intraerythrocytic development using expansion microscopy.使用扩展显微镜的红细胞内发育图谱。
Elife. 2023 Dec 18;12:RP88088. doi: 10.7554/eLife.88088.
2
Opportunities and challenges for deep learning in cell dynamics research.深度学习在细胞动力学研究中的机遇与挑战。
Trends Cell Biol. 2024 Nov;34(11):955-967. doi: 10.1016/j.tcb.2023.10.010. Epub 2023 Nov 28.
3
In-Depth Quantification of Cell Division and Elongation Dynamics at the Tip of Growing Arabidopsis Roots Using 4D Microscopy, AI-Assisted Image Processing and Data Sonification.
利用 4D 显微镜、人工智能辅助图像处理和数据声音化技术深入定量分析拟南芥根生长尖端的细胞分裂和伸长动态。
Plant Cell Physiol. 2023 Dec 6;64(11):1262-1278. doi: 10.1093/pcp/pcad105.
4
Unlocking the Potential of Zebrafish Research with Artificial Intelligence: Advancements in Tracking, Processing, and Visualization.利用人工智能释放斑马鱼研究的潜力:跟踪、处理和可视化方面的进展。
Med Biol Eng Comput. 2023 Nov;61(11):2797-2814. doi: 10.1007/s11517-023-02903-1. Epub 2023 Aug 9.
5
An automated neural network-based stage-specific malaria detection software using dimension reduction: The malaria microscopy classifier.一种基于自动神经网络的采用降维技术的特定阶段疟疾检测软件:疟疾显微镜图像分类器。
MethodsX. 2023 Apr 20;10:102189. doi: 10.1016/j.mex.2023.102189. eCollection 2023.
6
A particle-based computational model to analyse remodelling of the red blood cell cytoskeleton during malaria infections.基于粒子的计算模型分析疟疾感染期间红细胞细胞骨架的重塑。
PLoS Comput Biol. 2022 Apr 8;18(4):e1009509. doi: 10.1371/journal.pcbi.1009509. eCollection 2022 Apr.
7
Asynchronous nuclear cycles in multinucleated facilitate rapid proliferation.多核细胞中的异步核循环有助于快速增殖。
Sci Adv. 2022 Apr;8(13):eabj5362. doi: 10.1126/sciadv.abj5362. Epub 2022 Mar 30.
8
KAHRP dynamically relocalizes to remodeled actin junctions and associates with knob spirals in Plasmodium falciparum-infected erythrocytes.KAHRP 动态重定位到重塑的肌动蛋白连接点,并与疟原虫感染的红细胞中的节结螺旋体相关联。
Mol Microbiol. 2022 Feb;117(2):274-292. doi: 10.1111/mmi.14811. Epub 2021 Sep 22.
9
4D analysis of malaria parasite invasion offers insights into erythrocyte membrane remodeling and parasitophorous vacuole formation.疟疾寄生虫入侵的 4D 分析提供了对红细胞膜重塑和寄生泡形成的深入了解。
Nat Commun. 2021 Jun 15;12(1):3620. doi: 10.1038/s41467-021-23626-7.
10
Advances in Confocal Microscopy and Selected Applications.共聚焦显微镜技术的进展及其部分应用
Methods Mol Biol. 2021;2304:1-35. doi: 10.1007/978-1-0716-1402-0_1.