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甲硝唑被一种深度缠结的二聚体苹果酸酶激活于…… (原文结尾不完整)

Metronidazole Activation by a Deeply Entangled Dimeric Malic Enzyme in .

作者信息

Chakrabarty Arindam, Dutta Debajyoti, Baidya Mithu, Dutta Anirudha, Das Amit Kumar, Ghosh Sudip K

机构信息

Department of Bioscience and Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur 721302, India.

Department of Biotechnology, Thapar Institute of Engineering and Technology, Patiala 147004, India.

出版信息

Pathogens. 2025 Mar 13;14(3):277. doi: 10.3390/pathogens14030277.

DOI:10.3390/pathogens14030277
PMID:40137762
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11944484/
Abstract

Metronidazole is the preferred drug for treating amoebiasis caused by . Its antiamoebic activity is primarily attributed to activation by various reductases. This study reports an alternative activation pathway in mediated by the decarboxylating malic enzyme. Functional characterization of this NADPH-dependent enzyme reveals that it is secreted into the extracellular milieu and may play a role in adhesion to human enteric cells. Structural analysis of the malic enzyme (EhME) demonstrates that the protein forms a strict dimer, with the protomers interlocked by a unique knot structure formed by two polypeptide chains. This distinctive structural feature closely aligns EhME with its prokaryotic counterparts. In conclusion, our findings reveal that harbors a deeply entangled dimeric malic enzyme that contributes to metronidazole susceptibility, sharing structural similarities with bacterial malic enzymes.

摘要

甲硝唑是治疗由[具体病原体]引起的阿米巴病的首选药物。其抗阿米巴活性主要归因于各种还原酶的激活作用。本研究报道了由脱羧苹果酸酶介导的[病原体名称]中的另一种激活途径。对这种依赖NADPH的酶的功能表征表明,它被分泌到细胞外环境中,可能在[病原体名称]与人肠道细胞的黏附中起作用。对[病原体名称]苹果酸酶(EhME)的结构分析表明,该蛋白形成一个严格的二聚体,原体由两条多肽链形成的独特结结构相互锁定。这种独特的结构特征使EhME与其原核对应物紧密对齐。总之,我们的研究结果表明,[病原体名称]含有一种深度缠绕的二聚体苹果酸酶,它有助于甲硝唑的敏感性,与细菌苹果酸酶具有结构相似性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/519ab4f82fee/pathogens-14-00277-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/921a71513118/pathogens-14-00277-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/06a4018fe2a6/pathogens-14-00277-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/9657417564d3/pathogens-14-00277-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/d6f7b2793b9e/pathogens-14-00277-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/350c9fcd3f3c/pathogens-14-00277-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/414313575ca4/pathogens-14-00277-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/864f65e54702/pathogens-14-00277-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/519ab4f82fee/pathogens-14-00277-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/921a71513118/pathogens-14-00277-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/06a4018fe2a6/pathogens-14-00277-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/9657417564d3/pathogens-14-00277-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/d6f7b2793b9e/pathogens-14-00277-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/350c9fcd3f3c/pathogens-14-00277-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/414313575ca4/pathogens-14-00277-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/864f65e54702/pathogens-14-00277-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76db/11944484/519ab4f82fee/pathogens-14-00277-g008.jpg

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本文引用的文献

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ACS Infect Dis. 2021 Jan 8;7(1):174-188. doi: 10.1021/acsinfecdis.0c00735. Epub 2020 Dec 23.
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Proteomic signatures of metronidazole-resistant Trichomonas vaginalis reveal novel proteins associated with drug resistance.甲硝唑耐药阴道毛滴虫的蛋白质组学特征揭示了与耐药性相关的新蛋白。
Parasit Vectors. 2020 Jun 1;13(1):274. doi: 10.1186/s13071-020-04148-5.
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Molecular adaptations of NADP-malic enzyme for its function in C photosynthesis in grasses.
NADP-苹果酸酶在 C3 光合作用中适应其功能的分子机制。
Nat Plants. 2019 Jul;5(7):755-765. doi: 10.1038/s41477-019-0451-7. Epub 2019 Jun 24.
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Chimeric Structure of Plant Malic Enzyme Family: Different Evolutionary Scenarios for NAD- and NADP-Dependent Isoforms.植物苹果酸酶家族的嵌合结构:依赖NAD和依赖NADP同工型的不同进化模式
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Stability of structurally entangled protein dimers.结构缠结蛋白二聚体的稳定性。
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The crystal structure of the malic enzyme from Candidatus Phytoplasma reveals the minimal structural determinants for a malic enzyme.来自植原体的苹果酸酶的晶体结构揭示了苹果酸酶的最小结构决定因素。
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Dynamic secretome of : Case study of β-amylases.:β-淀粉酶的案例研究。
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The first structure of polarity suppression protein, Psu from enterobacteria phage P4, reveals a novel fold and a knotted dimer.极性抑制蛋白 Psu 的第一个结构来自于肠杆菌噬菌体 P4,揭示了一种新颖的折叠和打结的二聚体。
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