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单细胞RNA测序在胶质母细胞瘤中的当前应用:一项范围综述

Current Applications of Single-Cell RNA Sequencing in Glioblastoma: A Scoping Review.

作者信息

Ordóñez-Rubiano Edgar G, Rincón-Arias Nicolás, Shelton William J, Salazar Andres F, Sierra María Alejandra, Bertani Raphael, Gómez-Amarillo Diego F, Hakim Fernando, Baldoncini Matías, Payán-Gómez César, Cómbita Alba Lucia, Ordonez-Rubiano Sandra C, Parra-Medina Rafael

机构信息

Department of Microbiology, School of Medicine, Universidad Nacional de Colombia, Bogotá 111321, Colombia.

Department of Neurosurgery, Fundación Universitaria de Ciencias de la Salud-FUCS, Hospital de San José-Sociedad de Cirugía de Bogotá, Bogotá 110111, Colombia.

出版信息

Brain Sci. 2025 Mar 14;15(3):309. doi: 10.3390/brainsci15030309.

Abstract

The discovery of novel molecular biomarkers via next-generation sequencing technologies has revolutionized how glioblastomas (GBMs) are classified nowadays. This has resulted in more precise diagnostic, prognostic, and therapeutic approaches to address this malignancy. The present work examines the applications of single-cell RNA sequencing (scRNA-seq) in GBM, focusing on its potential to address tumor complexity and therapeutic resistance and improve patient outcomes. A scoping review of original studies published between 2009 and 2024 was conducted using the PUBMED and EMBASE databases. Studies in English or Spanish related to single-cell analysis and GBM were included. The database search yielded 453 publications. Themes related to scRNA-seq applied for the diagnosis, prognosis, treatment, and understanding of the cancer biology of GBM were used as criteria for article selection. Of the 24 studies that were included in the review, 11 focused on the tumor microenvironment and cell subpopulations in GBM samples, 5 investigated the use of sequencing to elucidate the GBM cancer biology, 3 examined disease prognosis using sequencing models, 3 applied translational research through scRNA-seq, and 2 addressed treatment-related problems in GBM elucidated by scRNA-seq. This scoping review explored the various clinical applications of scRNA-seq technologies in approaching GBM. The findings highlight the utility of this technology in unraveling the complex cellular and immune landscapes of GBM, paving the way for improved diagnosis and personalized treatments. This cutting-edge approach might strengthen treatment strategies against tumor progression and recurrence, setting the stage for multi-targeted interventions that could significantly improve outcomes for patients with aggressive, treatment-resistant GBMs.

摘要

通过新一代测序技术发现新型分子生物标志物,彻底改变了如今胶质母细胞瘤(GBM)的分类方式。这带来了更精确的诊断、预后和治疗方法来应对这种恶性肿瘤。本研究探讨了单细胞RNA测序(scRNA-seq)在GBM中的应用,重点关注其解决肿瘤复杂性和治疗抗性以及改善患者预后的潜力。使用PUBMED和EMBASE数据库对2009年至2024年间发表的原始研究进行了范围综述。纳入了与单细胞分析和GBM相关的英文或西班牙文研究。数据库搜索产生了453篇出版物。与应用于GBM诊断、预后、治疗和癌症生物学理解的scRNA-seq相关的主题被用作文章选择标准。在纳入综述的24项研究中,11项关注GBM样本中的肿瘤微环境和细胞亚群,5项研究了使用测序来阐明GBM癌症生物学,3项使用测序模型检查疾病预后,3项通过scRNA-seq进行转化研究,2项解决了scRNA-seq阐明的GBM中与治疗相关的问题。这项范围综述探讨了scRNA-seq技术在处理GBM方面的各种临床应用。研究结果突出了该技术在揭示GBM复杂的细胞和免疫格局方面的效用,为改善诊断和个性化治疗铺平了道路。这种前沿方法可能会加强针对肿瘤进展和复发的治疗策略,为多靶点干预奠定基础,这可能会显著改善侵袭性、治疗抵抗性GBM患者的预后。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1d3/11940614/90e22d4837c0/brainsci-15-00309-g001.jpg

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