Tosiano Melissa A, Lanni Frederick, Mitchell Aaron P, McManus C Joel
Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.
Department of Microbiology, University of Georgia, Athens, Georgia, United States of America.
bioRxiv. 2025 Mar 10:2024.07.09.602714. doi: 10.1101/2024.07.09.602714.
Hyphal growth is strongly associated with virulence in the human fungal pathogen . While hyphal transcriptional networks have been the subject of intense study, relatively little is known about post-transcriptional regulation. Previous work reported that P-Body (PB) factors Dhh1 and Edc3 were required for virulence and filamentation, suggesting an essential role for post-transcriptional regulation of these processes. However, the molecular roles of these factors have not been determined. To further study the function of PB factors in filamentation, we generated homozygous deletions of and in diverse prototrophic clinical strains using transient CRISPR-Cas9. Homozygous deletion strongly impaired growth, altered filamentation, and exhibited unusual colony morphology in response to heat stress in five strain backgrounds. Using RNA-seq, we found deletion disrupts the regulation of thousands of genes under both yeast and hyphal growth conditions in SC5314 and P57055. This included upregulation of many stress response genes in the absence of external stress, similar to deletion of the homolog. In contrast, we found was not required for heat tolerance or filamentation in diverse strains. These results support a model in which , but not , represses hyphal stress response transcripts in yeast and remodels the transcriptome during filamentation. Our work supports distinct requirements for specific mRNA decay factors, bolstering evidence for post-transcriptional regulation of filamentation in .
在人类真菌病原体中,菌丝生长与毒力密切相关。虽然菌丝转录网络一直是深入研究的主题,但对转录后调控的了解相对较少。先前的研究报道,P小体(PB)因子Dhh1和Edc3是毒力和丝状化所必需的,这表明转录后调控在这些过程中起着至关重要的作用。然而,这些因子的分子作用尚未确定。为了进一步研究PB因子在丝状化中的功能,我们使用瞬时CRISPR-Cas9在多种原养型临床菌株中产生了和的纯合缺失。在五个菌株背景中,纯合缺失严重损害生长、改变丝状化,并在热应激下表现出异常的菌落形态。通过RNA测序,我们发现缺失在SC5314和P57055的酵母和菌丝生长条件下破坏了数千个基因的调控。这包括在没有外部应激的情况下许多应激反应基因的上调,类似于同源物的缺失。相比之下,我们发现在多种菌株中耐热性或丝状化并不需要。这些结果支持了一个模型,即而非在酵母中抑制菌丝应激反应转录本,并在丝状化过程中重塑转录组。我们的工作支持了对特定mRNA衰变因子的不同需求,为丝状化的转录后调控提供了更多证据。