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通过环介导等温扩增法快速检测临床呼吸道标本中的CARDS毒素。

Rapid detection of CARDS toxin in clinical respiratory specimens by a loop-mediated isothermal amplification assay.

作者信息

Fang Yun, Xie Panpan, Zhang Xin, Zhang Yue, Yang Ning, Shi Yinghui, Xin Ruixia, Bai Yunbiao, Niu Wenkai, Yuan Xin

机构信息

Department of Respiratory and Critical Care Medicine, Senior Department of Infectious Diseases, the Fifth Medical Center of PLA General Hospital, Beijing, China.

Senior Department of Infectious Diseases, The Fifth Medical Center of PLA General Hospital, National Clinical Research Center for Infectious Diseases, Beijing, China.

出版信息

Front Cell Infect Microbiol. 2025 Mar 5;15:1496829. doi: 10.3389/fcimb.2025.1496829. eCollection 2025.

Abstract

In light of the absence of rapid and precise diagnostic laboratory tests for the detection of (MP), a prominent etiological agent implicated in a range of respiratory infections, we developed and evaluated a rapid and straightforward loop-mediated isothermal amplification (LAMP) assay targeting the MP community-acquired respiratory distress syndrome toxin (CARDS TX) gene. The LAMP assay was performed at 65°C for a duration of 60 min, yielding a minimum detection concentration of MP CARDS TX at 0.4986 pg/μl. The assay exhibited no cross-reactivity with 13 other prevalent pathogens associated with respiratory infections or with other common bacterial toxin genes. To further substantiate the validity of the LAMP assay, 200 pharyngeal swabs or bronchoalveolar lavage (BAL) samples were collected from inpatients diagnosed with community-acquired pneumonia (CAP) between June 2021 and July 2022. The results were compared with those obtained by the quantitative real-time polymerase chain reaction (qPCR) method for verification purposes. Of the 200 clinical specimens, 11 exhibited positive results for MP by LAMP and 10 displayed positive results for MP by qPCR ( = 1.000). In summary, a sensitive, specific, straightforward, and expeditious LAMP method for CARDS TX identification was developed to facilitate rapid detection of MP in point-of-care settings. This assay enables early and accurate diagnosis, even in resource-limited environments, which is important for proper antibiotic treatment and prognosis of MP infection.

摘要

鉴于缺乏用于检测肺炎支原体(MP)的快速准确的诊断实验室检测方法,MP是一系列呼吸道感染的主要病原体,我们开发并评估了一种针对MP社区获得性呼吸窘迫综合征毒素(CARDS TX)基因的快速简便的环介导等温扩增(LAMP)检测方法。LAMP检测在65°C下进行60分钟,MP CARDS TX的最低检测浓度为0.4986 pg/μl。该检测方法与其他13种与呼吸道感染相关的常见病原体或其他常见细菌毒素基因无交叉反应。为进一步证实LAMP检测的有效性,于2021年6月至2022年7月期间,从诊断为社区获得性肺炎(CAP)的住院患者中收集了200份咽拭子或支气管肺泡灌洗(BAL)样本。为进行验证,将结果与通过定量实时聚合酶链反应(qPCR)方法获得的结果进行比较。在200份临床标本中,11份通过LAMP检测显示MP呈阳性结果,10份通过qPCR检测显示MP呈阳性结果(Kappa值 = 1.000)。总之,开发了一种用于CARDS TX鉴定的灵敏、特异、简便且快速的LAMP方法,以促进在即时检测环境中对MP的快速检测。即使在资源有限的环境中,该检测方法也能实现早期准确诊断,这对于MP感染的适当抗生素治疗和预后至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/27e2/11962300/733c590270f1/fcimb-15-1496829-g001.jpg

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