Suppr超能文献

A-to-I RNA编辑介导蚜虫的跨代翅二态性。

A-to-I RNA editing of mediates transgenerational wing dimorphism in aphids.

作者信息

Zhu Bin, Wei Rui, Hua Wenjuan, Li Lu, Zhang Wenlin, Liang Pei

机构信息

Department of Entomology, College of Plant Protection, China Agricultural University, Beijing, China.

Berry Genomics Corporation, Beijing, China.

出版信息

Elife. 2025 Apr 3;13:RP96540. doi: 10.7554/eLife.96540.

Abstract

Wing dimorphism is a common phenomenon that plays key roles in the environmental adaptation of aphid; however, the signal transduction in response to environmental cues and the regulation mechanism related to this event remain unknown. Adenosine (A) to inosine (I) RNA editing is a post-transcriptional modification that extends transcriptome variety without altering the genome, playing essential roles in numerous biological and physiological processes. Here, we present a chromosome-level genome assembly of the rose-grain aphid by using PacBio long HiFi reads and Hi-C technology. The final genome assembly for is 447.8 Mb, with 98.50% of the assembled sequences anchored to nine chromosomes. The contig and scaffold N50 values are 7.82 and 37.54 Mb, respectively. A total of 18,003 protein-coding genes were predicted, of which 92.05% were functionally annotated. In addition, 11,678 A-to-I RNA-editing sites were systematically identified based on this assembled genome, and two synonymous A-to-I RNA-editing sites on were closely associated with transgenerational wing dimorphism induced by crowding. One of these A-to-I RNA-editing sites may prevent the binding of miR-3036-5p to , thus elevating CYP18A1 expression, decreasing 20E titer, and finally regulating the wing dimorphism of offspring. Meanwhile, crowding can also inhibit miR-3036-5p expression and further increase CYP18A1 abundance, resulting in winged offspring. These findings support that A-to-I RNA editing is a dynamic mechanism in the regulation of transgenerational wing dimorphism in aphids and would advance our understanding of the roles of RNA editing in environmental adaptability and phenotypic plasticity.

摘要

翅二型性是蚜虫环境适应性中发挥关键作用的常见现象;然而,响应环境线索的信号转导以及与此事件相关的调控机制仍不清楚。腺苷(A)到肌苷(I)的RNA编辑是一种转录后修饰,可在不改变基因组的情况下扩展转录组多样性,在众多生物和生理过程中发挥重要作用。在此,我们利用PacBio长读长HiFi测序和Hi-C技术,完成了蔷薇长管蚜的染色体水平基因组组装。最终组装的基因组大小为447.8 Mb,98.50%的组装序列被锚定到9条染色体上。重叠群和支架的N50值分别为7.82 Mb和37.54 Mb。共预测到18,003个蛋白质编码基因,其中92.05%得到了功能注释。此外,基于该组装基因组系统鉴定出11,678个A到I的RNA编辑位点,其中两个同义的A到I RNA编辑位点与拥挤诱导的跨代翅二型性密切相关。其中一个A到I RNA编辑位点可能会阻止miR-3036-5p与[基因名称未给出]结合,从而提高CYP18A1的表达,降低20E滴度,最终调节后代的翅二型性。同时,拥挤也会抑制miR-3036-5p的表达,进一步增加CYP18A1的丰度,从而产生有翅后代。这些发现支持A到I RNA编辑是蚜虫跨代翅二型性调控中的一种动态机制,将推动我们对RNA编辑在环境适应性和表型可塑性中作用的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/18a9/11968105/778f7b68bc59/elife-96540-fig1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验