Akiko Asano, Sakata Mizuki, Takuma Kato, Doi Mitsunobu
Osaka Medical and Pharmaceutical University, 4-20-1 Nasahara, Takatsuki, Osaka 569-1094, Japan.
Acta Crystallogr E Crystallogr Commun. 2025 Mar 27;81(Pt 4):345-349. doi: 10.1107/S2056989025002592. eCollection 2025 Apr 1.
The deca-peptide Boc-(d-Phe-tFPro-Val-Leu-Leu)-OMe () (Boc is -but-oxy-carbonyl, tFPro is 4--fluoro-l-proline d-Phe is d-phenyl-alanine, Val is valine and Leu is leucine) crystallized in a methanol-solvated form (CHFNO·CHO). Peptide has a sequence similar to gramicidin S (GS) incorporating tFPro. GS is a cyclic peptide, with the d-Phe-Pro unit known as a strong β-turn inducer in previous studies. Thus, it was initially assumed that would bend at the d-Phe6-tFPro7 position, potentially forming a sheet-like structure. However, the structure of was a helix, a surprising finding in GS-related structural studies. A factor enabling this helical formation could be the fluorine-H inter-actions between tFPro and the aromatic rings of d-Phe residues.
十肽Boc-(d-苯丙氨酸-4-氟-L-脯氨酸-缬氨酸-亮氨酸-亮氨酸)-甲酯()(Boc为叔丁氧羰基,tFPro为4-氟-L-脯氨酸,d-苯丙氨酸为d-苯丙氨酸,缬氨酸为缬氨酸,亮氨酸为亮氨酸)以甲醇溶剂化形式(CHFNO·CHO)结晶。肽与含有tFPro的短杆菌肽S(GS)具有相似的序列。GS是一种环肽,在先前的研究中,d-苯丙氨酸-脯氨酸单元被认为是一种强β-转角诱导剂。因此,最初推测会在d-苯丙氨酸6-4-氟-L-脯氨酸7位置弯曲,可能形成片状结构。然而,的结构是一个螺旋,这在与GS相关的结构研究中是一个惊人的发现。促成这种螺旋形成的一个因素可能是4-氟-L-脯氨酸与d-苯丙氨酸残基的芳香环之间的氟-氢相互作用。