Chaudhuri Aparna, Bandyopadhyay Bidyut, Mondal Buddhadev, Sarkar Aniket, Ghosh Sabyasachi, Panja Anindya Sundar
Department of Biotechnology School of Life Science , Swami Vivekananda University , Barrackpore, West Bengal India.
Department of Biotechnology Molecular informatics Laboratory , Oriental Institute of Science and Technology Vidyasagar University , Midnapore, West Bengal India.
In Silico Pharmacol. 2025 Apr 7;13(1):55. doi: 10.1007/s40203-025-00351-3. eCollection 2025.
Chikungunya virus (CHIKV) is a mosquito-borne virus which causes chikungunya disease. Two biological vectors and transmit CHIKV to the victim body. According to the report of the European Centre for Disease Prevention and Control, epidemics of chikungunya disease existed in 2024 over America, Africa, Europe and Asia. Although 50% CHIKV infected person show chronic clinical symptoms and several troubles associated with chikungunya, still there are no effective vaccines or medications on market. So availability of another CHIKV inhibiting materials and mechanisms are necessary. For this purpose recently plant-derived bioactive compounds with antiviral properties are used to inhibit chikungunya infection. In this present research work 69 CHIKV inhibiting active compounds were chosen for ADMET analysis. Drug likeness of active compounds was also analyzed based on Lipinski's rule of five. Based on the drug likeness, active compounds (Baicalein, Epicatechin, Genistein, Quercetin, Resveratrol were finally screened for molecular docking with CHIKV envelope proteins using Auto Dock program. Among the five active compounds, Genistein showed highest binding energy for both E1 (ΔG = - 8.3 kcal/mol) and E2 (ΔG = - 7.1 kcal/mol). Molecular dynamics simulations signify that Genistein forms a stable complex with the CHIKV E1 and E2 proteins over a 50 ns period with a significant number of hydrogen bonds. So this present study concluded that Genistein will act as potent CHIKV E1 and E2 inhibiting active compounds. To evaluate efficiency or inhibiting capacity of finally selected Genistein against CHIKV, in vivo and in vitro validation should be conducted.
The online version contains supplementary material available at 10.1007/s40203-025-00351-3.
基孔肯雅病毒(CHIKV)是一种通过蚊子传播的病毒,可引发基孔肯雅病。两种生物媒介将CHIKV传播到受害者体内。根据欧洲疾病预防控制中心的报告,2024年美洲、非洲、欧洲和亚洲都出现了基孔肯雅病疫情。尽管50%的CHIKV感染者会出现慢性临床症状以及与基孔肯雅病相关的多种问题,但市场上仍没有有效的疫苗或药物。因此,需要其他抑制CHIKV的物质和机制。为此,最近具有抗病毒特性的植物源生物活性化合物被用于抑制基孔肯雅病毒感染。在本研究工作中,选择了69种抑制CHIKV的活性化合物进行ADMET分析。还根据Lipinski的五规则分析了活性化合物的类药性。基于类药性,最终筛选出活性化合物(黄芩素、表儿茶素、染料木黄酮、槲皮素、白藜芦醇),使用Auto Dock程序与CHIKV包膜蛋白进行分子对接。在这五种活性化合物中,染料木黄酮对E1(ΔG = -8.3 kcal/mol)和E2(ΔG = -7.1 kcal/mol)均显示出最高的结合能。分子动力学模拟表明,染料木黄酮在50纳秒内与CHIKV E1和E2蛋白形成稳定复合物,并形成大量氢键。因此,本研究得出结论,染料木黄酮将作为有效的抑制CHIKV E1和E2的活性化合物。为了评估最终选定的染料木黄酮对CHIKV的抑制效率或能力,应进行体内和体外验证。
在线版本包含可在10.1007/s40203-025-00351-3获取的补充材料。